Aphelocoma coerulescens (scrub jay): 138110295
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Entry
138110295 CDS
T10543
Symbol
PCDH19
Name
(RefSeq) protocadherin-19
KO
K16499
protocadherin delta 2
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
acoe04515
]
138110295 (PCDH19)
Cell adhesion molecules [BR:
acoe04515
]
Cadherins
Protocadherins
138110295 (PCDH19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
Motif
Other DBs
NCBI-GeneID:
138110295
NCBI-ProteinID:
XP_068871122
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All DBs
Position
4A:1142951..1201432
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AA seq
1095 aa
AA seq
DB search
MGALAALLGAALLWAGAGALVNLKYSVEEEQRAGTVIANVAKDARDAGFVLDPRQPAAFR
VVSNSAPHLVDISPGSGLLVTKQKIDRDLLCRQSPKCVISLEVMSSSMEICVIKLEIKDL
NDNAPSFPTDQIELEISETASPGTRVPLESAYDPDSGSFGVQSYEITPNDLFGLETKTRG
DGSRFAELVVEKSLDRETQSHYSYVITALDGGDPPNFGTVELSIRVIDSNDNNPLFEEPA
YTVSVPENAPPGTPVIRLNASDPDEGTNGQVLYSFHSYVSERARELFQIDPQSGLITVSG
AIDYEEGHVYELDVQAKDLGPNSIPAHCKVTISVQDANDNPPVINLLSVNSELVEVSENA
PPGYVIALVRVSDRDSGANGRVQCKLLGNVPFRLQEYESFSTILVDGRLDREQRDQYNLT
IQARDNGIPSLQATKSFTVKITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDPDL
GLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGNPS
LQSNATVRVIVLDVNDNTPVITAPPLVNGTAEVYIPRNAGVGYLVTVVKADDYDEGENGR
LSYEMVEGDRGFFEIDQVNGEIRTTRAFGENAKTAYELIVVAHDHGKTSLSASALILIYL
SPALDAQESIGSVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCRIAEYSY
GHQKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSE
STFLNVESQNNRNAGSNHIYHHTFTGQSPQQPDLIINGMPLPETENYSFDSNYVNSRAHL
IKSSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGLYCDTAVNDVLNTSVPSMGSQGPEQE
QSEGFHCREECRILGHSDRCWMPRGAVPSRAKSPEHGRNVIALSIEATAVDAEPYADCST
KRTFATFGKEGSEPPAEERLANPKGKRTVDSAACSPKVSGAVREAGNGCEAVSPVTSPLH
LKSPLSGKPAVPYGAGHCTGSREREPFGNSGPSRPTEAEPRGADSESSGQEGNPLLQERR
DKDSPGARRLKDIVL
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgggggctctcgcggcgctgctgggggccgccttgctgtgggccggcgccggggccctc
gtcaacctcaagtactcggtggaggaggagcagcgggccggcacggtgatcgccaacgtc
gccaaggacgcccgggacgccggtttcgtgctggacccccggcagcctgccgccttccgg
gtggtctccaactcggccccccacttggtggacatcagccccgggtccgggctgctggtg
accaagcagaagatcgacagggacctgctatgccgacagagccccaagtgtgtcatctcg
ctggaggtgatgtccagctccatggagatctgcgtgatcaagctggagatcaaggaccta
aacgacaatgcgcccagcttccccaccgaccaaatcgagctggagatctcggagacagcc
agccctggcactcgggtgccactggagagtgcctatgacccggactcgggcagctttggt
gtgcagagctatgagatcacccccaatgacctctttggtctggagaccaagacacggggt
gatgggtcccgttttgctgagctggtggtggagaagagcctggaccgtgagacccagtcc
cactacagctacgtgatcacagcgctggatggtggtgacccgcccaactttggcacagtt
gagctcagcatccgcgtcatcgactccaatgacaacaacccgctcttcgaggagccagcc
tacaccgtcagtgtgcctgaaaatgccccaccggggacaccggtcatccgcctcaatgcc
tctgacccggatgagggcaccaatggccaggtcctctactctttccacagctacgtctct
gagcgggcccgggagctcttccaaatcgacccccagagtggcctcatcacagtgagcggt
gccatcgactatgaggagggtcatgtctatgagctggacgtgcaggccaaggacttgggg
cctaactccatccctgctcattgcaaagtgaccattagtgtccaggatgccaacgacaac
ccacccgtcatcaacctgctctctgtcaacagtgagctggtggaggtgagcgagaacgcc
ccgccggggtacgtcatcgccctggtgcgggtctcggatcgcgactccggggccaacggg
cgggtgcagtgcaagctcctgggcaatgtgccttttcgactccaggagtacgagagcttc
tccaccatcctggtggatgggcggctggaccgggagcagagggaccagtacaacctcacc
atccaggctagggacaatggcatcccttccctgcaggccaccaagtccttcaccgtcaag
atcaccgatgagaatgacaaccatccccacttctccaaaccctattaccaagtcatcgtg
caggagaacaacaccccaggggcctacctcctctcagtctcagccagagaccctgacctg
ggcctcaatggcagcgtgtcctaccagattgtgccctcccaagtcagggacatgcctgtt
ttcacctatgtctccatcaaccccaactctggagatatctatgctttgaggtccttcaat
catgagcagaccaaggcctttgagtttaaggtcttggcaaaagatgggggtaatccctct
ctgcagagcaatgccactgtcagggtgatcgtcctggatgtcaacgacaacacgcccgtg
atcacggccccgccgctggtcaacgggacggcggaggtgtacatccccaggaacgcgggg
gttggctacttggtgacagtggtcaaggcagatgactatgatgagggtgaaaatggcaga
ctttcctatgaaatggtggaaggagacagaggattttttgagatcgaccaggtcaatgga
gaaataaggaccaccagagcctttggggagaacgccaaaacagcctatgagctcatcgtg
gtggctcatgaccatgggaaaacatctctctcggcttctgccttgattttgatatacctg
tctccagccctggatgcccaggagtccataggatctgttaacctctccttgattttcatt
attgccctggggtctattgcagccattctttttgtcaccatgatctttgtggcagtcaag
tgcaaaagggataacaaggaaatcaggacctacaactgcagaatcgcagagtactcctac
gggcatcaaaagaaatcaagcaagaagaagaaaatcagcaagaatgatatccgcctggta
ccgcgggacgtggaggagacggataaaatgaacgttgtgagctgctcctctctcacttcc
tccctcaactacttcgactaccaccagcagaccctgccgctgggctgccggcgctccgag
agcaccttcctcaacgtggagagccagaacaacaggaacgccggctccaaccacatttac
caccacaccttcacggggcagagcccccagcagcccgacctcatcatcaacgggatgccg
ctgccggagactgaaaactactcctttgattccaactacgtgaacagcagagctcattta
ataaaaagctccacgttcaaggacttggaggggaacagtctgaaggacagtggccatgag
gagagtgaccagacggacagcgagcacgatgtgcagcggggcctctactgcgacacggcc
gtcaacgatgtgctgaacaccagcgtcccctccatgggctcccagggccctgagcaagag
cagagcgaggggttccactgccgggaggagtgccgcatcctgggccactcggacaggtgc
tggatgccccgcggcgccgtgcccagccgcgccaagtcccccgagcacggcaggaacgtc
atcgccctgtccatcgaggccacggcggtggacgcagagccttacgcagactgcagcaca
aaaaggaccttcgccaccttcggcaaggagggcagcgagcccccggccgaggagcggctc
gccaaccccaaaggcaaaagaacggtggactcggccgcctgcagccccaaggtgagcggc
gccgtgcgcgaggccggcaacggctgcgaggccgtcagccccgtcacctcgcctctgcac
ctgaagagccccttgtccggcaagccggcggtgccgtacggcgccgggcactgtaccggc
agccgggaacgggagccctttgggaacagtggcccttcccggcccacggaggcagagccc
cgcggggcggacagcgagagcagcgggcaggagggcaacccgctcctgcaggaacgccgg
gacaaggactcgcccggcgcccggagactaaaggacatcgtcctctga
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