Aphelocoma coerulescens (scrub jay): 138110349
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Entry
138110349 CDS
T10543
Symbol
EDA
Name
(RefSeq) ectodysplasin-A isoform X1
KO
K05480
ectodysplasin-A
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
138110349 (EDA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
acoe04052
]
138110349 (EDA)
Cytokines and neuropeptides [BR:
acoe04052
]
Cytokines
Tumor necrosis fators
138110349 (EDA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Collagen
Motif
Other DBs
NCBI-GeneID:
138110349
NCBI-ProteinID:
XP_068871204
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Position
4A:complement(5746722..5808238)
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AA seq
354 aa
AA seq
DB search
MGAERRAAAPAPRGCACGGGGGSWRLFLGFFALSLALHVLTLGCYLELRSELRRDRGPQP
AAPPRRDGTAAAPGAPAGGRPQRAAEGAERRQQLALLNFFHPEEKLHVGEEGRRVRRNKR
SKGSEGPDGPSSVKNKKKGKKAGPPGPNGPQGPPGPPGPQGPPGIPGIPGIPGTTVMGPP
GPPGPPGPQGPPGVQGPSGATDKASSRDIQPAVVHLQGQGSAIQVKNDLSGGVLNDWSRI
TLNPKVFKLHARSGELEVLVDGTYFIYSQVEVYYINFTDFASYEVVVDEKPFLQCTRSIE
TGKTNFNTCYTAGVCLLKARQKIAVKMVHADISINMSKHTTFFGAIRLGDAPAS
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcggagcgcagggcggcggcgccggctccccgcggctgcgcctgcggcggcggc
ggcggcagctggcggctcttcctcggcttcttcgcgctgtcgctggcgctgcacgtcctg
acgctgggctgttacctggagctgcgctccgagctccgccgcgaccgcggcccgcagccc
gcggccccgccgcgccgggacgggacggcggcggcgcccggagccccggccgggggccgc
ccgcagcgcgcggccgagggcgcggagcggcgccagcagctggccttgctgaacttcttt
caccccgaggagaagctgcacgttggagaagaagggagacgcgtccgtcggaataaaagg
agtaaaggcagcgaagggcccgacggtccaagttcagtgaaaaacaagaaaaagggtaaa
aaggctggtcctccagggcccaacggtccccaagggccaccagggcctcccgggccgcag
ggtccccccggcattcccggcatccccggaattccaggcacaaccgtgatgggaccgccc
ggcccccctggcccgccgggccctcagggaccacccggagtgcagggtccctcaggtgcc
acagacaaggccagctccagagacatccagccagctgtggtccatctccaaggccaaggc
tcagcaatccaagtgaagaatgatctttcaggtggagtcctcaatgactggtctcgcatc
actctgaaccccaaggtgtttaagctgcatgcccgcagtggggagctggaggtactggtg
gacggcacatacttcatctatagtcaggtagaagtctactacatcaacttcactgatttc
gccagctacgaggtggtggtggacgagaagccctttctgcaatgcactcggagcatcgag
accggcaagaccaacttcaacacctgctacacggccggggtgtgcctgctcaaagccagg
cagaagatcgccgtgaagatggtgcacgctgacatctccatcaacatgagcaagcacacg
actttctttggggccatccgcctgggagatgcaccggcatcctag
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