KEGG   Aphelocoma coerulescens (scrub jay): 138110349
Entry
138110349         CDS       T10543                                 
Symbol
EDA
Name
(RefSeq) ectodysplasin-A isoform X1
  KO
K05480  ectodysplasin-A
Organism
acoe  Aphelocoma coerulescens (scrub jay)
Pathway
acoe04060  Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:acoe00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    138110349 (EDA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:acoe04052]
    138110349 (EDA)
Cytokines and neuropeptides [BR:acoe04052]
 Cytokines
  Tumor necrosis fators
   138110349 (EDA)
SSDB
Motif
Pfam: TNF Collagen
Other DBs
NCBI-GeneID: 138110349
NCBI-ProteinID: XP_068871204
LinkDB
Position
4A:complement(5746722..5808238)
AA seq 354 aa
MGAERRAAAPAPRGCACGGGGGSWRLFLGFFALSLALHVLTLGCYLELRSELRRDRGPQP
AAPPRRDGTAAAPGAPAGGRPQRAAEGAERRQQLALLNFFHPEEKLHVGEEGRRVRRNKR
SKGSEGPDGPSSVKNKKKGKKAGPPGPNGPQGPPGPPGPQGPPGIPGIPGIPGTTVMGPP
GPPGPPGPQGPPGVQGPSGATDKASSRDIQPAVVHLQGQGSAIQVKNDLSGGVLNDWSRI
TLNPKVFKLHARSGELEVLVDGTYFIYSQVEVYYINFTDFASYEVVVDEKPFLQCTRSIE
TGKTNFNTCYTAGVCLLKARQKIAVKMVHADISINMSKHTTFFGAIRLGDAPAS
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgggcgcggagcgcagggcggcggcgccggctccccgcggctgcgcctgcggcggcggc
ggcggcagctggcggctcttcctcggcttcttcgcgctgtcgctggcgctgcacgtcctg
acgctgggctgttacctggagctgcgctccgagctccgccgcgaccgcggcccgcagccc
gcggccccgccgcgccgggacgggacggcggcggcgcccggagccccggccgggggccgc
ccgcagcgcgcggccgagggcgcggagcggcgccagcagctggccttgctgaacttcttt
caccccgaggagaagctgcacgttggagaagaagggagacgcgtccgtcggaataaaagg
agtaaaggcagcgaagggcccgacggtccaagttcagtgaaaaacaagaaaaagggtaaa
aaggctggtcctccagggcccaacggtccccaagggccaccagggcctcccgggccgcag
ggtccccccggcattcccggcatccccggaattccaggcacaaccgtgatgggaccgccc
ggcccccctggcccgccgggccctcagggaccacccggagtgcagggtccctcaggtgcc
acagacaaggccagctccagagacatccagccagctgtggtccatctccaaggccaaggc
tcagcaatccaagtgaagaatgatctttcaggtggagtcctcaatgactggtctcgcatc
actctgaaccccaaggtgtttaagctgcatgcccgcagtggggagctggaggtactggtg
gacggcacatacttcatctatagtcaggtagaagtctactacatcaacttcactgatttc
gccagctacgaggtggtggtggacgagaagccctttctgcaatgcactcggagcatcgag
accggcaagaccaacttcaacacctgctacacggccggggtgtgcctgctcaaagccagg
cagaagatcgccgtgaagatggtgcacgctgacatctccatcaacatgagcaagcacacg
actttctttggggccatccgcctgggagatgcaccggcatcctag

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