Aphelocoma coerulescens (scrub jay): 138110493
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Entry
138110493 CDS
T10543
Symbol
AFF2
Name
(RefSeq) AF4/FMR2 family member 2 isoform X1
KO
K15194
AF4/FMR2 family member 2
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
Transcription machinery [BR:
acoe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
138110493 (AFF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138110493
NCBI-ProteinID:
XP_068871560
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Position
4A:complement(15119341..15565644)
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AA seq
1284 aa
AA seq
DB search
MDLFDFFRDWDLEQQCHYEQDRSALKRKEWERRNQEVQQDEDLFASGFNLFGEPYKTNKG
DALANRVQNTLGNYDEMKDLLTNHSNQSHLVGIPKNSVPQTPIDKNEQNFFPEPRNRMIP
SHQISGNSSTSMPPPSSLSSNSTLLHSHQSSRKSRTDWSRSGHNSSGAQPSQSSGQQSRT
KHSSSHDPSQGRYEDLYNCQSEQHKSGGTEEANPMATSSHSRRHTHAKSAPGEHTYKENS
HSKSPTELEFVGHGPGSPLPSTSLLTANNGLSTQNFPPGLHCKNSMVQQKPTAYVRPMDG
QDQVPNDSPELKPPIEIESGYGNQSFGTLLEGKVNTPSSKNKVPKLNIPPVSEVALPNDS
SCVEEILREMTHSWPPPLTAIHTPGKAEQTKFSIPSKDSQHLTSGYNVQKWSDPAGKVAT
KSVPQKSMLEDDLKLSSDEDDNEQAAEKTKLRNIPVNSLPVPAAHATGLAHSSGGSGSSS
ESESSSESDSDSESSSSDSECNEESRSATPEPEPPSTNKWQLDKWLNKVNPHNKTIINNQ
NEPHSESSSQAQSNQQAEGPNKGKLNSSLPPSDSKDRAILSPIREKAKPRVAQKTPEAKS
SKQKSPAHNEPASQRTTGKKQPKKVERTSSVEEYNWPKPNNTSNTPKEKDTQEPPEQPKV
RTKAAVGKTAPRKEPRTSTGLTSEKKKYRGPSKIVPKSREFIETDSSTSDSNTDQEESLQ
AKVLPACTGSGSGVKVKDSGSNILSVSSLTSNGSNTSIDQTSNDLEEQLFSPIPIVQNEL
LSPLREYEELKSLWVKIDLSLLSRIPGQETFETTSVKSEPREANVKHRRPSRESPTPAAE
KPSTKSKRKHKQTESLDTFVESKKQRLEDPPASCLLPPCISPIPNHRISSTKESSSSSVK
KVTKKREEKLFPPPLSPLLDEPVHRRHSSDNSSFSQEPTVTNTSQTSSSSSSVSKHRKNE
NKSSSNPKGICEEESHNTPTANTLLDTSHLEPDIWSAMPTLSNGNSEPRRPKITFDDVLH
NADYYMQEAKKLKHKADALLEKFGKAVNYADAALSFIECGNAMERDPLEAKSPYTMYSET
VELIRYAMRLKNFTGSSATEGDKKLAVLCYRCLSLLYLRMFKLKKDHAMKYSRSLMEYFK
GFTRCYTDVKGRMSKQNSSKASQAPSPWGGNGKSTETPSPMSLSPSPVSSAGSSTGTAGS
SSAGTITIPQRIHHMAASHVNITNNVLRSYEHWDMADKLTKENKEFFVDLDSVMGPLTQH
SSMTNLVRYVRQGLHWLRIEAHLL
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggacctattcgactttttcagggactgggacttagagcagcagtgtcactatgagcaa
gaccggagtgcacttaagaggaaggaatgggagaggagaaaccaggaagtccagcaagat
gaagatctctttgcttcaggttttaacctctttggggaaccctacaagacaaataaaggc
gacgcccttgcaaaccgtgtccagaacacattgggaaattatgatgagatgaaagatctg
ttaaccaaccactccaaccagagccaccttgtaggaatcccaaagaattctgtcccacag
acacccattgacaaaaatgaacagaactttttcccagaaccaagaaacaggatgatccca
tctcatcagatcagcggtaactcatcaacatcaatgcctccgccttcttcattgtcatct
aattctactttgctacacagtcaccagagcagcaggaagtcgaggacagactggtcacgc
agtggtcacaactccagtggggcccagccaagccaatccagtggtcagcagagtcggaca
aagcacagctcttctcatgacccgtcacagggcaggtatgaagatctctataattgccag
agtgagcagcataaaagtgggggaactgaggaagcaaatcctatggcaacatcttcacat
tcaaggaggcacactcatgcaaagtcagcacctggagaacacacttacaaagaaaacagt
cattcgaagtcacccacagagcttgagtttgtaggccatggtccgggatctccacttcct
tccacttctttgttaactgcaaacaatggtctttcgactcagaatttcccaccaggactt
cactgtaaaaacagtatggtccagcaaaagcctacagcttatgtcaggcctatggacggt
caggaccaggtacccaatgactcacctgaactgaaacccccaatagaaattgagagtgga
tatggaaatcagtcctttggaacactgctggaaggaaaagtgaacacacctagttcgaag
aacaaagtaccaaagctcaacattcctcctgttagtgaagttgcccttcccaatgactcc
agctgtgtggaagaaatactgcgggagatgacccattcctggcctcctcctcttactgct
attcacactcctggcaaggctgagcagaccaagttttctattccaagcaaggactcccaa
catctgacctcaggatacaatgtacaaaagtggagtgatccagcagggaaagttgcaact
aagtcagtgccacaaaagtcaatgcttgaggatgatctaaaacttagcagtgatgaagat
gacaatgaacaggctgccgaaaagacaaaattgagaaacattcctgtaaacagcctgccc
gtgccagcggcacacgccaccggcttggcccattccagcggcggctccggcagctccagc
gagtccgagagcagctctgagtccgactccgacagcgagagcagctccagcgacagcgag
tgcaacgaggagtcgcgcagtgccacgccagagcccgaacccccctcaacaaacaaatgg
cagctggataaatggctaaataaggtgaacccccacaacaagaccatcatcaacaatcaa
aatgagcctcacagcgagagcagctcccaggcccagagcaaccagcaggccgaagggcca
aacaaagggaagctcaacagcagcctgcccccgagcgattccaaagaccgggcgatcctc
agtcccatccgagagaaagccaaaccacgggttgcccagaaaaccccagaggcaaaaagc
tccaagcagaagtcaccagctcataatgagccagcttcacaaaggactactgggaaaaag
caacccaaaaaggtagaaaggacttccagtgtagaagagtataactggcccaaaccaaat
aataccagcaacactcccaaagaaaaagacacacaggaaccccccgagcagccaaaggtt
cgaactaaagcagcagttgggaagacagctccaaggaaagaaccacgaactagcacaggt
ctcacttcagagaagaaaaagtacagaggccccagcaaaattgttccgaagtcccgggaa
ttcattgaaacggattcatctacttccgactcaaacacagaccaggaggagagcttgcag
gcaaaggtgctgccagcctgcacggggtctggcagtggtgtcaaagtgaaggactctggc
agtaacatcctcagcgtaagtagcttaacgagcaatggcagcaacacatccatcgaccag
accagcaatgacctggaggagcagctcttttctcctatcccaattgtacaaaatgaactt
ctgtccccactgagagaatatgaagaactcaaatctctgtgggtgaaaatagaccttagt
ttactctctaggatacctggacaggaaacttttgagaccacgtctgtgaaaagtgaacca
agagaggcaaatgtgaaacacaggcgaccatctcgagagtcccctaccccagcagctgaa
aaaccctccacaaaatccaaaaggaaacacaagcagacggaaagcctggatacctttgtt
gaaagcaagaagcagcgcctggaggaccctccggcttcctgcctgctcccaccttgtatt
tctccaataccgaaccacagaataagcagcactaaagagagcagcagtagctcggtgaag
aaggtgacaaagaaaagagaagagaagctgttccctcctccgttgtccccactcttggac
gagcctgtgcaccggcggcacagcagtgacaacagctccttcagccaggagcccactgtc
acaaacacctcacagaccagcagctcttcctcctctgtgtctaaacacagaaaaaatgaa
aataaatcttcttcaaaccccaaaggaatctgtgaggaagaatctcacaatacacccaca
gccaacactcttcttgacaccagccatctagaaccagacatctggtctgcaatgccaacg
ctttccaatgggaattctgagcccagaagacccaaaataacatttgatgatgtgcttcac
aatgcagattattacatgcaagaggctaagaagctgaagcataaagcagatgcattgctg
gagaagttcggtaaagcagtgaattatgctgatgctgccctctccttcatcgagtgtggg
aacgctatggagcgagatccattagaagctaaatctccatacaccatgtactcagagact
gtggaactcatcaggtatgcaatgagactcaagaatttcacaggctcttctgccacagaa
ggggacaagaaattagcagttttatgctaccgatgcttatcacttctctacttgagaatg
tttaaactaaagaaggaccatgctatgaagtactccagatctctgatggaatattttaag
ggttttacaaggtgctacacagacgtgaaaggcagaatgagtaagcagaactcttcaaaa
gcctcacaggccccctcaccttggggcggcaatggaaagagcacagaaaccccctcgccc
atgtccctgagcccgtcccccgtcagctctgctggaagcagcacgggcaccgccggctcg
tcctcggcggggaccatcaccatcccccagcgcatccaccacatggctgccagccacgtc
aacatcaccaacaacgtcctgcgcagctacgagcactgggacatggctgacaagctgacc
aaggagaacaaagagttctttgtagacctggactcagtgatgggacccttaacacaacac
agcagtatgaccaatctggttcgttacgttcgccagggactccactggctccgcattgag
gctcatttgttgtag
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