Aphelocoma coerulescens (scrub jay): 138110495
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Entry
138110495 CDS
T10543
Symbol
FMR1
Name
(RefSeq) fragile X messenger ribonucleoprotein 1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoe03019
]
138110495 (FMR1)
Messenger RNA biogenesis [BR:
acoe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
138110495 (FMR1)
Factors involved in mRNA localization
Other mRNA localization factors
138110495 (FMR1)
mRNA cycle factors
Stress granule specific factors
138110495 (FMR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
FXMR_C2
Tudor_FRX1
KH_1
Agenet
KH-I_KHDC4-BBP
KH_2
pAdhesive_11
KIF2A-like_1st
Motif
Other DBs
NCBI-GeneID:
138110495
NCBI-ProteinID:
XP_068871573
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Position
4A:complement(15589587..15620704)
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AA seq
565 aa
AA seq
DB search
MEELVVEVRGSNGAFYKAFVKDVHEDSITVSFENNWQPERQIPFHDVRFPPPAGYNKDIN
ESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKP
ATKDTFHKIKLAVPEDLRQMCAKESAHKDFKKAVGAFSVTYDSENHQLIILSINDVTTKR
ANMLIDMHFRSLRTKLSLILRNEEASKQLESSRQLASRFHEQFVVREDLMGLAIGTHGAN
IQQARKVPGVTAIDLDEDTCTFHIYGEDQDAVKKARSYLEFAEDVIQVPRNLVGKVIGKN
GKLIQEIVDKSGVVRVRIEAENDKNIPQEEGMVPFVFVGTKDSITNATVLLDYHLNYLKE
VDQLRLERLQIDEQLRQIGATSRPPPNRTDKDKGYMTDDGPGLGRGSRPYRNRGHSRRGP
GYASGTNSEASNASETESDHRDELSDWSAAPAEEERDNYLRRGDGRRRGGGARGQGGRGR
GGFKGNDEQSRTDNRQRNSREAKGRTADGSLEIRIDCNNERSVHTKTLQNTSSEGSRLRA
GKERNPKKEKTDSADAQQPLVNGVP
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctggtggtggaggtgcggggctccaacggggccttctacaaggcatttgta
aaggatgtgcatgaagattcaataacagtttcatttgaaaacaactggcaaccagagaga
caaatcccattccatgatgtgaggttcccaccacctgcaggctataataaagatataaat
gaaagcgatgaagtagaggtttattccagggcaaatgagaaagaaccctgctgttggtgg
ttggctaaagtgagaatgataaagggtgagttctacgtaatagaatatgcagcctgtgat
gctacatacaacgaaattgtcacaattgagcgtttgagatctgtgaaccccaataaaccc
gcaacaaaagatacttttcataaaatcaaactggcagttcctgaagatttaaggcaaatg
tgtgccaaagaatctgcacataaggacttcaaaaaggcagttggagctttttctgtaaca
tatgattctgaaaaccaccagcttattattttatcaatcaacgatgtaaccacaaagcgg
gcgaacatgctgattgatatgcactttcggagtcttcgcaccaagttatccctgatactg
agaaatgaagaagccagcaaacagctggagagttctaggcaacttgcatcccggttccat
gaacagtttgttgtacgtgaagacctaatgggtttggccattggcactcatggtgctaat
atccaacaagccagaaaagtccctggagtgactgccattgatcttgatgaagatacttgt
acattccatatttatggagaggatcaagatgcggtgaaaaaggcaagaagttaccttgaa
tttgctgaagacgtcattcaagtcccaaggaatttagtaggaaaagtaataggaaaaaat
ggaaaactgattcaggaaatagtggacaaatccggcgttgtaagagtgagaattgaggct
gaaaatgataaaaatattccacaagaagagggcatggtaccatttgtgtttgtaggaacc
aaggatagcatcactaatgcaactgttcttctggattatcatcttaattatttaaaggaa
gtggaccagctgcgtttggaaagattgcaaattgatgagcaactgcgacagattggagcc
acttccaggccccccccaaaccgcacggacaaggacaaagggtacatgaccgacgatggg
ccgggcctcggccgtggcagccggccctacagaaaccgcgggcacagccggcgtgggccg
ggctatgcttcaggaactaattctgaagcatcaaatgcttctgaaacagagtctgatcac
agagacgagctgagcgattggtcggcggccccggcagaggaggagcgggacaattacctg
cgcaggggggacgggcggaggcgcggcggcggcgccagaggccaaggcgggaggggccgc
ggaggattcaaaggcaatgatgaacagtcgcgaacagataaccgtcagcgtaactcaaga
gaggcaaaagggagaacagcagacggatctcttgagatcagaattgactgcaataatgaa
aggagtgtccacactaaaaccttacagaatacctcgagcgaaggcagccggctgcgcgcg
ggcaaggagcggaacccgaagaaggagaagacggacagcgcagacgctcaacagccgctg
gtgaacggagtcccctaa
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