Aphelocoma coerulescens (scrub jay): 138110516
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Entry
138110516 CDS
T10543
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03013
Nucleocytoplasmic transport
acoe03015
mRNA surveillance pathway
acoe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138110516
09122 Translation
03013 Nucleocytoplasmic transport
138110516
03015 mRNA surveillance pathway
138110516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoe03019
]
138110516
03041 Spliceosome [BR:
acoe03041
]
138110516
Messenger RNA biogenesis [BR:
acoe03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
138110516
Spliceosome [BR:
acoe03041
]
Common components
Common spliceosomal components
Cap binding complex
138110516
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
138110516
NCBI-ProteinID:
XP_068871615
LinkDB
All DBs
Position
4A:17566187..17569033
Genome browser
AA seq
168 aa
AA seq
DB search
MSGLLHTTLSGLNSDSYCEISQYRDQHFRGSRQLQEKSLKISSTLYVGNLSFYTTEEQIQ
ELFSKCGDVKRIVMGLDKIKKTPCGFCFVEYYTRADAEHAMRFINGTRLDDRIIRTDWDA
GFKEGRQYGRGKTGGQVRDEYRTDYDVGRGGFGKIIQMQKANHQPAIY
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggctgctgcacaccacgctgagcgggctcaacagcgactcgtactgcgagatc
agccagtaccgggaccagcacttccggggtagcaggcagctgcaggagaaatccctgaag
atttcttccacgctgtatgtcgggaatctgtccttctacaccaccgaggagcagatccag
gagctcttctccaagtgcggagatgtcaagaggattgtcatgggtctggacaagatcaag
aaaaccccctgtggcttctgctttgtagagtactacacgagagcagatgctgagcacgcc
atgcggtttatcaacggcacgcggctggacgaccgcatcatccgcacggactgggatgca
gggtttaaggaggggcgacagtatgggagaggaaagactggaggacaggtgcgagatgaa
taccggacagactacgatgtgggaagaggtggctttggcaagatcattcagatgcagaag
gcaaatcaccagcctgcaatctattaa
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