Aphelocoma coerulescens (scrub jay): 138110583
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Entry
138110583 CDS
T10543
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
138110583 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoe03000
]
138110583 (ATRX)
03036 Chromosome and associated proteins [BR:
acoe03036
]
138110583 (ATRX)
Transcription factors [BR:
acoe03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
138110583 (ATRX)
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
138110583 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
DUF6395
Motif
Other DBs
NCBI-GeneID:
138110583
NCBI-ProteinID:
XP_068871762
LinkDB
All DBs
Position
4A:19358029..19424118
Genome browser
AA seq
2448 aa
AA seq
DB search
MESSGEPECLLLLQECSSFPGAAIPGEALLSGSPGVAGAGAAGSDGVGRGWLQHVGSFGK
SREPKGSPASMENNRDEGSSSSERTKSLGLSRSKRKPTVVTKYVGSDDEQIVDETVNEDI
SNENSENDVDMQSLPKGTVVVQPEPVLNEDKDDFKGPEFRSRNTVKMKPEAPKKRGEEGL
HGIVSCTACGQQVNHFQKDSIYRHPTLKVLICKTCYKYYMSDDISRDSDGMDEQCRWCAE
GGNLICCDFCHNAFCKKCILRNLGRKELSTILDENNQWHCYICHPEPLLDLVTACDSVFE
NLEQLLQQNKKKMKVENEKSKIYDHTVKFSPKRNNANCNGEEKKLDNSYSGSLTYSYKAL
MVPKDLLKKTKKLVETTTNLNSSFVSFLKNAAENVEISPTVQLCQLKAFKSVLSDMKKAH
LSLEEGLNLEIQALNVKIKDKNTKEKKTEVRSEKNEVKKDEGKEHVALKEDDAVQTQKKV
VSERPDSEPMDQSVPSVEQTDNKAAPGEEKKSGRNEEPQYEPNSTEALDMDIVSIPSSVP
EDIFETLESAMEIQMPSDEQDSGNTAADHETLNPNTKLTTPVKDSKGGTKLKSSAKGTKE
LIVKLTPVSLSESTVKAEDEDNSLEKDSKDVDASKDVDASQPRAANCDSVKQNHNVGSEP
STENEAVPVEDADLRRSPRVKTTPLRRPTDISPLTSNSEEDSNDTSNEKRKRKSSKQPRR
KNDKRNSSDSTADGPSPNKLSKSKKPYDLDHSSDSDEMPAVLKEAGMMSRSSSDSESNSE
APANNQKTSDFQKSQPVKDENGKRKRKSSSSGSDLDAKRGKSAKNAAAAKKKRQNYSDSS
NYDSELEKEIKMLSKIEAAKKSKKTYSQKDDSYDSSEEEQRKKVSSKRKVNLKKKRGKSS
EDDDAEKSSPEKEINHSSKDKKTGKRSAAKEKINRDSKEKSAKGKHDESSDVEKSSLEKE
ESPEVKKKKDLKKKKAQDDSSSESTEKSAKKEHKLESSKDRLKNKKGSESKAKKSEKLKK
KGLKKEQDDSSSDLDKSSPEKGSSNSSENDKIKKEPVFTEKRNLRERVAKRVHIDLSSDT
EKSPQKEESSSDDAVRRKKRTETKEKKKISQKKKISKKEQNDSSSSDEESYEDTKKKIKR
GSVKESKKSNLKKKVAKKKVVVTSSSSSDKEENDDQNSTGDGSSDEQKIRPVTESLMLSA
DAGFCQSSGDEGEALSRTIPMEEEEDDDDDDPENRIAKKMLLEEIKANLSSDEDTSSDEQ
PEEGKKKPAKQTENTGDDGENEKEDNKSEKEEGNSESDSEEEETSKKPRYRHRLLRHKLT
VSDGESGEEKKVVKPKDKKEGGKRRNRRKVSSDDSNDSEFHESAVSEEVSESEDDQRPRT
RSAKKAEAEENQRSYKQKKKRRRIKVQEDSSSENENKSNSENEDNDDSKSPGKGRKKIRK
IIKDDKLRTETQNALKEEEERRKRIAEREREREKLREVIEIEDASPLKCPITTKLVLDED
EETKEPLVQVHRSIVTRLKPHQVDGVQFMWDCCCESVKKTKTSPGSGCILAHCMGLGKTL
QVVSFLHTVLLCDKLDFRTALVVCPLNTALNWLNEFEKWQEGLEDEERLEVCELATVKRP
QERSYMLQHWQDEGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGH
ILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFIN
PIQNGQCADSTLVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKYEYVLEVRMTPI
QCKLYQYYLDHLTGVGGGNEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYF
DEDSMDDFIASDSDETSMSLSSDDYAKKKKSKGKKVKKECSSSGSGSDNDVEVIKVWNSR
SRGGGEGNVEDLTNNPASTKSDEGKATSSSNPGSPAPDWYKDFVTDADAEVLEHSGKMVL
LFEILRMAEELGDKVLVFSQSLISLDLIEDFLELANREKSDRDKPPIYKGEGKWFRNIDY
YRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSY
DIQSIFRVYRFGQNKPVFVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNE
LTELYTFEPDLLDDPNSEKKKKRDTPMLPKDTILAELLQINKEYIVGYHEHDSLLDHKEE
EELTEEERKAAWAEYEAEKKGMTMRFNMPTGTNMIPTNFNSQTYIPYNLGALSAMSNQQL
EDLINQGREKVVEATNSVAAARIQPLEDIISSIWKENLTLTESQVQALALNRQASQELDV
KRREAIYNDVLGKQQMLIGCVQRILMNRRLQHQYNQQQQQQMSYQQAAMGHLMMPKPPNL
IMNPSSYPTIDVRGMYQSVSGGMQPPPLQRAPPPMRGKNPGPSQGKSM
NT seq
7347 nt
NT seq
+upstream
nt +downstream
nt
atggagagctcaggagagccagagtgcctgctcttgctccaagagtgcagctcgttccct
ggagcagcaatcccaggggaagccctgctctctgggagccctggagtggctggggcagga
gcagccgggtcagacggagttgggaggggatggctgcagcacgtggggtcatttggtaaa
agtagagaacctaaaggaagtccagcttcaatggagaacaatagggatgagggaagtagt
tcttctgaaagaaccaaatccttaggattatcccgttccaaaaggaaacctacagttgta
acaaaatatgttgggtcagatgatgaacaaatcgtagatgaaactgtaaatgaagatatt
tcaaatgagaactcagaaaatgatgtagatatgcaaagcttgcctaaaggtacagtggtt
gtacagcctgagccagtgctgaatgaagacaaagatgattttaaagggcctgaatttaga
agcagaaataccgttaaaatgaaacctgaagctcccaaaaagcgtggagaagaaggactc
catggaattgtaagctgtacagcttgtgggcagcaggtgaaccattttcaaaaggattca
atctatagacaccctacactgaaagtgcttatatgtaagacttgctacaagtattacatg
agtgatgacattagtcgtgactcggatgggatggatgaacagtgtaggtggtgtgctgaa
ggtggaaatttgatttgctgtgacttttgccataacgccttctgtaaaaagtgcattttg
cgcaacctgggccgaaaggagctctcgaccatcctggatgaaaataaccagtggcactgc
tatatttgccatccagagcctctgttggacttggtcactgcgtgtgacagtgtctttgaa
aatttggaacagttacttcaacaaaacaaaaaaaagatgaaagttgaaaatgaaaaaagt
aaaatatatgaccacacggtcaagttttctccaaagagaaataatgcaaattgtaatggg
gaagaaaaaaaactagataattcatattcaggttcactaacatactcttataaagcacta
atggtgccaaaagacttgcttaagaaaacaaaaaaactggttgaaacgacaacaaatctg
aattctagctttgtaagctttttgaaaaacgctgcagaaaatgtagaaataagcccaact
gtgcaactgtgccagctgaaagcttttaaatctgtgctgagtgacatgaaaaaagctcat
ctgtcactagaagaaggcctgaacctggagattcaagcattgaatgttaaaatcaaagat
aaaaataccaaagagaaaaaaactgaggttagatcagaaaaaaatgaggtgaaaaaagat
gaaggaaaggagcatgtggcattaaaagaggatgacgctgtacagacacagaaaaaagtt
gtgtcggagcggcctgacagtgagcccatggatcaaagtgttccctcagtggaacagaca
gataacaaggcagctcctggggaagagaaaaagtctggcagaaatgaagaaccacagtat
gagcccaacagtacagaggctttagacatggatattgtgtccatcccctcgtctgttcct
gaagatatttttgagactctggaatctgctatggagattcagatgccatcagatgagcaa
gacagtggaaacacagcagcagatcatgagactctaaatccaaatacaaaattgaccact
cctgtgaaagatagcaaaggtggtaccaagttaaaatcatcagctaaaggaacaaaagaa
ttgattgtaaaattgactcctgtttccctttcagagtccacagttaaagctgaagatgaa
gacaacagtctagaaaaggacagtaaagatgttgatgcatctaaagatgttgatgcatct
caacctagagcagcaaactgtgattctgtaaaacaaaaccataatgttggcagcgagccc
tccacggagaacgaggctgtgcccgtggaggacgcggatctccggaggtcgccgcgcgtc
aagaccaccccgctgaggcgccccacggacatcagccccctgacatccaactcagaggag
gacagcaatgacacgagcaatgaaaaacggaagagaaaatcgtccaagcaaccaaggagg
aaaaacgataaaagaaattcttctgacagcactgctgatggtcctagtcctaacaaactt
tccaaatccaaaaagccatatgacttagatcacagctcagactctgatgagatgccagct
gtccttaaagaggcagggatgatgagtcgcagctcctcagacagtgaaagcaacagcgaa
gcgccagcaaataatcagaagacttcagattttcaaaagagtcaaccagtaaaggatgaa
aacgggaaacgaaaaaggaaaagttccagttccggttcagatttagatgctaaaagaggc
aaatcagctaaaaacgctgctgctgctaaaaagaaacgacaaaactactcagattcttca
aactatgattctgagttggaaaaagagataaaaatgttgagtaaaattgaggctgcaaaa
aaatcgaagaaaacatactcccaaaaagatgatagttatgattcctctgaagaagagcag
aggaaaaaagtaagcagtaagagaaaggtaaatctgaagaagaagagaggtaaatcttct
gaagatgatgatgctgagaagtcttccccagagaaggaaattaatcactcttctaaagat
aaaaaaacgggtaagaggtcagctgctaaggagaagataaacagagactctaaagaaaag
tctgcaaaaggaaaacacgatgagtcttctgatgttgagaagtcttcgctggagaaagag
gagagtcctgaagttaagaaaaagaaggatttgaaaaagaaaaaggcacaggatgattct
tcttctgagagtactgagaaatcggcaaagaaagagcacaagttggagtcttccaaagac
agactcaagaacaaaaaaggatcagaaagcaaagcaaagaaatctgaaaaactgaaaaag
aaaggtttgaagaaagaacaagatgattcctcttctgatcttgataagtcatctccagag
aaaggaagcagcaattcttctgaaaacgacaaaattaaaaaggaacccgtgtttacagaa
aagaggaatttgagagagagagtagctaaaagagtgcacattgatttatcctctgatact
gagaaatctccccaaaaagaggagagttcttctgatgatgccgtgaggcgtaaaaaacga
actgaaacgaaagaaaagaaaaaaataagccagaaaaagaaaatttccaagaaagaacag
aacgactcatcctcttctgatgaggagtcctatgaagacactaagaaaaagattaaaaga
ggatcagtaaaagaaagtaaaaagagcaacttaaaaaagaaggtggcaaaaaagaaggtg
gttgtcacttcctcttcctcatctgataaggaagaaaatgatgatcagaattccacaggc
gatggaagcagcgacgagcagaagatcaggccggtgaccgaaagcttgatgctgtctgct
gatgcaggattttgtcagtcatcaggagatgagggagaggctctatcaaggactatccca
atggaggaggaggaagatgatgatgatgacgaccctgagaatagaattgccaagaaaatg
cttttagaagaaatcaaagccaatctttcctctgatgaggatacgtcttcagatgagcag
ccggaggaaggaaagaagaaacctgcaaagcaaactgaaaacacaggagatgatggagag
aatgaaaaggaagacaataagtctgaaaaggaagaaggtaattctgagtcggattcagag
gaagaagaaacatccaagaagcccagatacagacacagactgctgaggcacaagctcacc
gtgagtgatggggaatctggagaagaaaaaaaggtggtgaaaccaaaagacaaaaaagaa
ggggggaagcgcagaaatagaaggaaagtgagcagtgatgactcgaatgactctgagttc
cacgagtctgcagtgagtgaggaggtcagtgagtctgaggatgaccaacgaccaaggaca
agatcagccaaaaaagctgaggcagaagaaaaccagcgcagctacaaacagaaaaagaaa
cgaaggaggataaaggttcaggaggattcatcaagtgaaaatgagaataagagtaactct
gagaatgaggacaatgatgactcaaagtctcctggaaaaggcaggaagaaaataagaaaa
attattaaagatgataaacttagaacagaaacacaaaatgcacttaaagaagaagaagaa
agaagaaaacgtatagcagagagagaacgggagagagagaaactgagagaggtgatagag
atcgaagatgcttcacctctgaaatgtcccattacaactaagctggttttagatgaagat
gaagaaaccaaagaaccattagtgcaggttcacaggagtatagtgaccagactgaaacca
caccaagtagatggtgttcagttcatgtgggattgctgttgtgaatctgtaaaaaaaacc
aagacatctcctggctctggctgcattcttgctcactgtatgggcctggggaaaacgtta
caggtagtaagttttctccacacagtcttgctatgtgacaaactggattttcggacagct
ctggtcgtgtgtccactcaacactgccttgaactggctgaatgagtttgaaaaatggcaa
gaaggtttggaagatgaggaaagactagaggtctgtgagctggcaactgtgaaaaggcct
caggagaggagctacatgctgcagcactggcaggacgagggaggtgtgatgatcattggc
tacgagatgtaccgaaatctggcccaaggcaggaatgtgaagagtagaaaacttaaagaa
atatttaataaagctttagtcgacccaggtcctgactttgtggtgtgtgatgaaggacac
atactgaaaaatgaagcatctgctgtctctaaggcaatgaattctattcggtctaggaga
agaataattctgacaggaacaccactgcagaataatcttatagaatatcactgcatggtt
aacttcattaaggagaatttgcttggctcaattaaggaattccggaatcgattcatcaat
cccatccagaacggtcagtgtgcagactccactctggtggatgtcagagtgatgaagaaa
cgtgctcacatcctctatgagatgttggctggctgtgttcagaggaaagattacacagca
ttaacaaagttcctgccccccaaatacgagtacgtgctcgaggtgaggatgaccccgatc
cagtgcaagctgtaccagtattacctggatcacttgacaggtgtaggtggtggcaatgaa
ggtggaagaggcaaagctggagctaaactattccaggatttccagatgttgagcagaatc
tggactcacccttggtgtttgcagctggattatattagcaaagaaaataagggctatttt
gatgaagacagcatggatgacttcatagcttcagattccgatgaaacttccatgagctta
agttctgatgattatgcaaagaaaaaaaaatccaaggggaaaaaggtgaagaaagagtgt
agctcaagtggaagtggcagtgataatgatgttgaagtcattaaagtctggaattcaaga
tctcgtggaggtggggaaggaaatgtagaagatcttacaaacaaccctgcatcaacaaag
tcagatgaaggcaaagctacatcatcttccaatcctggtagcccagctccagactggtac
aaagattttgtcactgatgcagatgctgaggtgttggaacattctgggaaaatggtgctt
ctctttgaaattcttcgaatggcagaggagctgggagacaaagtcctagtgttcagccag
tccctaatatctctggatttgatagaagatttcctggagctggctaatagggagaagtct
gacagagataagcctcctatctataaaggtgaaggaaaatggttcagaaatattgattat
tatcgcttggatggctcaaccacagctcagtccagaaagaaatgggctgaagagttcaat
gatgaaactaatgtgagaggccgcttgtttatcatatccactaaagcaggttccctggga
ataaacctggtggctgctaacagagtcatcatctttgatgcctcttggaacccctcctat
gatatccagagcatcttcagggtttatcgctttgggcagaacaagcctgtgtttgtctac
aggtttttggctcagggaaccatggaggacaagatctacgaccggcaggtgacgaagcag
tcgctgtccttcagggtggtggaccagcagcaggtggagcgtcacttcaccatgaacgag
ctcactgagctctacacctttgagccagacctgctggatgaccccaactcggagaagaag
aagaagagggacacccccatgttgccaaaagacacgatcctggcagagctgctccagatc
aacaaggagtacatagttgggtatcatgagcatgattcactcctggaccataaggaggaa
gaggaactcactgaagaagaaaggaaggcagcctgggcagaatatgaagcagaaaagaag
ggcatgaccatgcgtttcaacatgccaacagggaccaacatgattcccacaaatttcaac
tctcagacatatattccttacaacttgggtgctctgtcagcaatgagtaaccaacagctg
gaggacctcattaatcaaggaagagagaaggtagtggaagcaaccaacagtgtggctgca
gcgagaatccagccccttgaagacatcatttcatccatatggaaagaaaacttaaccctg
acagagagccaggtgcaggccctggccctgaacagacaggcaagccaggagctggatgtg
aagcgccgagaagccatttacaacgacgtcctcgggaaacagcagatgttaatcggttgt
gtccagaggatcctgatgaacaggcggctccagcaccagtacaaccagcagcagcagcag
cagatgtcctaccagcaagcagccatgggccacctcatgatgccaaagccaccaaattta
atcatgaatccttccagctacccaaccatagatgtgagaggaatgtatcagtcagtgtct
ggtgggatgcagccaccacccctacaacgagcaccacccccaatgagaggcaaaaatcca
gggccttcccaagggaaatcaatgtga
DBGET
integrated database retrieval system
