Aphelocoma coerulescens (scrub jay): 138110591
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Entry
138110591 CDS
T10543
Symbol
RLIM
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acoe04121
]
138110591 (RLIM)
Enzymes [BR:
acoe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138110591 (RLIM)
Ubiquitin system [BR:
acoe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138110591 (RLIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING-like
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
138110591
NCBI-ProteinID:
XP_068871787
LinkDB
All DBs
Position
4A:19879866..19897506
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AA seq
595 aa
AA seq
DB search
MESSDSSDKGSIDQSEAQRQSQLDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEIT
EEELLRRLHQVKEGPPQQNSDENRGAESAEDVSNGDSIIDWLNSVRQTGNTTRSGQRGNQ
SWRAVSRTNPNSGDFRFSLEINVNRNNGNTNPETENEPSVEPSNGEDLENSQSDSEIPRS
ESPSVRQPGSERSSAEELTAEEASPPRGQRRARSRSPEQRRTRARTDRSRSPINAVSEAP
RRSHHNTSSQTLDHSSASEAEGSSRTRQHVTLRQHTVGTEVPSENAVLFSPPETRPAPQA
AGSSESTGTSESAAPGQRPPTIVLDLQVRRVRPGEYRQRDSIANRTRSRSQTPNNTVTYE
SERGGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELS
YFMYSDSDADPSGPAPNQNVETSEPQSGGGGTSGSENADVSSGEVYEGGHEASSTSGARR
EGRNTRGSVTFEESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLAMRNFGESDALKT
CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRESVV
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggaaagctcagattcaagtgataaaggaagtattgatcaatcagaagcccaacgtcag
agccagctggatcggttagatcgagaagaagctttctatcagtttgtgaacaacctgagt
gaagaggactacaggcttatgagagataacaatttgctaggaacaccaggtgaaattact
gaagaagagttgctgagaaggctacaccaagttaaagaaggtccgccacagcaaaacagt
gatgagaatagaggtgcagagtccgcagaagatgtttcaaatggagattctataatagac
tggcttaattcagtccgacagactggaaacacaacacgaagtgggcagcgaggaaaccag
tcctggagagcagtgagccggactaacccaaatagtggcgacttcagattcagtttggaa
ataaatgtcaatcgtaataatgggaacacgaatccagaaactgagaatgagccatctgta
gagccttccaatggggaggatttggaaaacagccaaagtgactctgaaattccaaggtct
gaatcaccatctgtaaggcagcctggatcagaaaggagcagtgcggaggagctgacggct
gaggaggcttcccctcctagagggcagaggagagccaggagtaggagtccagaacagcgg
cggacgcgggctaggactgatagaagtaggtcacctattaatgcagtgagtgaggcccct
cgcaggtctcatcacaacacatcatctcaaacacttgaccactcctcagcgagcgaggct
gagggcagctctagaactaggcagcacgtgacgttaaggcagcacacagtggggactgag
gtgccaagtgaaaatgcagttctcttttccccccctgaaacgaggcctgctcctcaagca
gcaggttcttcagaaagtaccggcaccagtgagtctgcggctcctgggcagaggcctccc
accatagtgcttgacctccaggtgagaagagttcgcccgggagagtaccggcaaagggac
agcatagccaacaggacccggtcccggtcccagacccccaacaacacggtcacctacgag
agcgagcgcggaggcttccggcgcacgttctcccgctcggagcgggctggagtgagaact
tacgtcagcaccattaggattcccatccgtaggatcttaaacacaggcctgagcgagact
acgtcagttgccatccagaccatgctgaggcagatcatgacaggcttcggggagctcagt
tacttcatgtacagtgatagcgatgcagatcccagtgggccagctcccaatcagaacgtg
gagacttctgagccgcagagcggaggtgggggcacctcgggcagtgagaatgcagatgtt
agctcgggggaggtgtacgagggtgggcacgaggctagctcaacatctggtgccaggcgg
gaaggccggaatacgaggggatcggtcacttttgaagaaagcggttctctaccattcctt
agccttgcacagtttttcctactcaacgaagatgatgatgaccaaccaagaggactcacc
aaagaacaaattgacaacctagccatgaggaattttggtgagagcgacgctctgaaaacc
tgcagcgtgtgcatcacagagtacacggagggcaacaagctccgcaagctgccgtgctcg
cacgagtaccacgtgcactgcatcgaccgctggctgtcggagaactccacctgccccatc
tgccgcagagcagtcttagcttctgggaacagagagagcgttgtctaa
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