Aphelocoma coerulescens (scrub jay): 138110660
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Entry
138110660 CDS
T10543
Symbol
RPGRIP1L
Name
(RefSeq) protein fantom isoform X1
KO
K16550
protein fantom
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
acoe01009
]
138110660 (RPGRIP1L)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
acoe03037
]
138110660 (RPGRIP1L)
Protein phosphatases and associated proteins [BR:
acoe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138110660 (RPGRIP1L)
Cilium and associated proteins [BR:
acoe03037
]
Primary cilia and associated proteins
MKS complex
138110660 (RPGRIP1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-C2_1
RPGR1_C
Motif
Other DBs
NCBI-GeneID:
138110660
NCBI-ProteinID:
XP_068871943
LinkDB
All DBs
Position
4A:complement(21798231..21845280)
Genome browser
AA seq
1061 aa
AA seq
DB search
MPVSADETVGNLAVRDTVLTPAGIEGSQESSSTQNVKAQQVLSRISREELEDRFLRLRDD
HILLKQYANKQEEKIKRMTTKLIRLVNDKRKCDRADYGPMRLGQALELEEMIEHLRERVR
ELEKQNESLRNKLISTKQQLQIQGHRLCPYSSVQSRVNTGLKRENEAAGMPEHTKKGMRF
QSSEVRSPDLVLPKYGQSLLEDSRAEIRNLETVIESQRKHIEELERAREILVSQLRRKEK
EIEESLLRLKEQGTASQRLNIQDNVEMIKVRKQLAEKSNALSAMEGKFLQLQENLKNLKT
NHDALLAKGDELNVQLKEERSKCFHLQKELQSVTVSNRRTEELQERINDLEKENELLKEN
YNKLHNSVFSLPHEQQWKSKEQQLKLQIAKLETAIKSDLADKNEILDKIKVERDQKEKLM
QDNKDLQLRYLEQKQQLDDLKNQVKFLTKFQESDVDVAEVSETLLLIKDQKQRKNVDLLF
LEKVEDDIHKDLEYSMQELQLTHAETVQELEKTRNLLIVQHKISKDYQTEVETMTRKMES
LQKDYELQLEQYTHLLDIRAARIRKLEAQLRDIVYDTKPLKSRPEVLPSDPVDGFVETVH
LERGENLFEIHISKVIFSSEAVHTFGDWEPATFCTYAFYDFELQITPVVHGNAPSYDFTS
QFLVQSDDSFFHYVQENSITLEVHRAYGIDYETIASCQLKFHEILENDGRIYNTANLIGK
RGHIQNYGTIEYWIRLQVPMDQAIILYRQRSKALGYITHSFREHEQPSQTPPLKMKQRSD
QAHKRVSFLDLSTIHMAEAKQLSGDTVKEMAEEMQRENEELSHLSEEQLADQTLITSRDE
TEIIEELEPEAQEDHQEDDAVESIKTDSDDCIISSPVSTNIKQLSQSIHGNYLEVEKIRI
KITSLGLSESRITSDETIQQLFVECRLNNFLAEETPLSLPKPTGGQRIHYNYSTVINVDK
EDNHAEREYLKSILLKPDLPADSLKFTVVSDPPEDEQDLECEDIGFAYVSLKEIFQKQRD
IIEQDIDVFDSQDASAVIGKLTVTVEALHALRSVHEECKNV
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtttcagctgatgaaactgtggggaacctggctgtgagagatacagtcctaact
ccagctggaattgaaggatcacaagaatcatcatctacacagaacgtaaaagctcaacaa
gtcctatcacgaatcagtcgagaggagctggaagacagattccttcgtttacgtgatgac
cacatcctactcaaacagtatgcaaataagcaagaggagaaaattaaaagaatgaccacc
aagttaatacggcttgttaatgataaaagaaaatgtgaccgggctgactatggacccatg
cggctgggtcaggctctggagctggaagaaatgattgagcatttgcgagaaagagttcgt
gagcttgagaaacaaaatgagagcctccggaacaaactcatttcaactaaacagcagctc
cagattcaaggccataggctgtgtccatacagctccgttcagtctcgtgtgaacactggt
ctcaaaagagagaatgaggctgctggcatgccagagcacaccaagaagggaatgagattt
cagagttcagaagtgaggtcacctgaccttgtgctccccaaatatggacagagtctgctc
gaggattcaagggctgaaatcagaaatttggagactgtcattgagtcccaaaggaaacac
attgaggaactagaacgtgccagagagattcttgtgagtcaactaagaaggaaagaaaag
gaaattgaagaatccctcctacggctgaaagagcagggtacagccagccaaaggctaaac
attcaggacaacgtggaaatgatcaaggtccgtaaacagctggctgagaaaagcaatgct
ctttcagcaatggaaggaaaatttctccagttgcaagagaacctaaagaacttgaagacc
aaccatgatgctttattagcaaaaggtgatgaactgaatgtacagcttaaagaggagcga
tccaagtgtttccatcttcagaaagagttgcagtcagtaactgtttcaaacagaaggaca
gaagagttacaggaaagaataaatgatctagaaaaagagaatgagcttttaaaggaaaac
tacaataagctgcataatagtgtcttcagtctgccccatgaacagcaatggaaatcaaag
gaacagcaactgaaactgcaaattgctaagcttgagacggctatcaaatctgatttagca
gacaaaaatgaaatcctcgacaagatcaaagtagaaagagaccaaaaggaaaagctcatg
caagacaacaaagacctgcagttacgctacctggaacaaaagcaacaactagatgatcta
aaaaatcaagtgaagtttttgaccaagtttcaggaaagtgatgttgatgtggcagaagtc
agtgaaaccctcttgcttataaaggatcaaaagcaacggaaaaatgtggaccttctgttt
ttggaaaaagtggaagatgatatccataaagatttagaatactccatgcaggagctgcag
ttaacgcatgcggaaacagtgcaagaacttgaaaagacaagaaacttgttaattgtgcag
cacaaaattagcaaagattaccagactgaagtagaaacaatgacaagaaagatggaaagt
ctgcagaaagactacgagttacaactggagcagtatacccatcttcttgatattagagct
gcacggatcagaaaactagaagcccaactaagagatattgtctatgatacaaaaccactt
aagtccagaccagaagtgttgccaagtgatccagtggatggatttgttgaaactgtccat
ttagaaagaggagagaacctttttgaaattcatatcagcaaagtgatcttctcgtctgaa
gctgtgcacacttttggtgactgggaacctgcaaccttttgtacttatgcattctatgac
tttgaacttcagataacccctgtagttcatgggaacgccccatcatatgacttcacttct
cagtttcttgtgcagtctgatgacagcttctttcactatgtacaagaaaacagcatcacg
cttgaggttcatcgtgcgtatggcatagactatgaaacaattgcttcttgtcaacttaag
ttccatgaaatcttggaaaatgatggcaggatctacaacacagcaaatttaattggaaaa
agaggacacattcaaaattacggtaccatagaatactggatcaggttacaagttcctatg
gaccaagctattattctctacagacagaggtcaaaggctctgggatatataacacacagt
tttagggaacatgaacaaccatcccagacaccaccactcaaaatgaagcagcgttcagat
caagcacacaagagagtctcttttctggatcttagtacaatacacatggcagaggctaaa
cagctatcaggtgacacggtgaaggagatggctgaagaaatgcaacgggaaaatgaagag
ctctctcatctgtcagaggagcagctggctgaccaaacattgattacttctagagatgag
acagaaataatcgaagaattggaaccagaagctcaagaagatcatcaagaggatgatgct
gttgaatcaataaaaactgacagtgatgactgtattatttcaagtccagtatccacaaat
attaaacagctgagtcagagtatacatggcaattatttggaagttgaaaaaatccggatt
aaaattacatcactcggtcttagtgagtcacgaattacatcagatgaaacaatacagcaa
ctgttcgtagaatgcagattaaacaatttccttgcagaggagaccccactgtcacttcca
aaaccaacaggtggtcagaggattcactataactatagcactgtgataaacgtggataag
gaagataatcatgcagaaagagagtacctcaaatcaattcttctaaagccagatctacct
gctgacagcctaaaatttacagtggtcagtgatcccccagaagatgaacaggatcttgaa
tgcgaggatattgggtttgcttatgtcagtttaaaagagatattccagaagcaaagagat
atcattgagcaagatattgatgtttttgattcacaagatgccagtgcagtaattggaaag
ctcacagtgactgtggaggccctccatgcactgcgttcagtccatgaggaatgcaaaaat
gtctag
DBGET
integrated database retrieval system
