Aphelocoma coerulescens (scrub jay): 138110723
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Entry
138110723 CDS
T10543
Symbol
PAX6
Name
(RefSeq) paired box protein Pax-6 isoform X1
KO
K08031
paired box protein 6
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoe03000
]
138110723 (PAX6)
Transcription factors [BR:
acoe03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
138110723 (PAX6)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_32
HTH_23
HTH_Tnp_IS1
Homeobox_KN
HTH_SB
DUF6115
HTH_28
Motif
Other DBs
NCBI-GeneID:
138110723
NCBI-ProteinID:
XP_068871999
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Position
5:complement(10640975..10665824)
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AA seq
422 aa
AA seq
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MQNSHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRY
YETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSV
SSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPTQDGCPQQ
EGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFAR
ERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIP
QPTTPVSSFTSGSMLGRTDTALTNTYSALPPMPSFTMANNLPMQPPVPSQTSSYSCMLPT
SPSVNGRSYDTYTPPHMQTHMNSQPMGTSGTTSTGLISPGVSVPVQVPGSEPDMSQYWPR
LQ
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacagtcacagcggcgtgaaccagctcggcggggtgttcgtcaacgggaggccg
ctgcccgactccacgcggcagaagatcgtggaactcgctcacagcggcgcccggccctgc
gacatctcccggatcctgcaggtgtcgaatggatgtgtgagtaaaattttgggcaggtat
tacgaaactggctccatcagacccagggcaatcggaggtagtaaaccgagagtagcgact
ccagaagttgtaagcaaaatagcgcagtataaacgagagtgcccctccatctttgcgtgg
gagattcgagacagattactatcagagggggtctgtaccaacgataatatacccagtgtg
tcgtcgataaacagagtcctacgcaacctggctagcgaaaagcaacagatgggtgccgac
gggatgtacgacaagctaaggatgctgaacgggcagacggggacctggggcacccgaccc
ggctggtatcccggcacctcggtacctgggcagcccacacaagatggctgtccgcaacag
gagggaggaggggaaaacactaactccatcagctctaatggagaagattcagatgaggcc
caaatgagactccagctgaaaagaaagctgcagagaaataggacatcctttacccaagag
caaatcgaagcccttgagaaagaatttgagaggacccactatcccgatgtgtttgcaaga
gagagactagctgctaaaatagacctgcctgaagcaaggatacaggtgtggttttccaac
agaagggccaaatggagaagggaagagaagctgaggaaccagcgaagacaagccagcaac
actcccagccacattcccatcagtagtagtttcagcacaagcgtttaccagccgatccca
caaccaaccacccccgtttcctctttcacatcaggttccatgttgggcaggacggacacg
gcgctcacgaacacgtacagcgcgctgccgcccatgcccagcttcaccatggccaacaac
ctgcctatgcaacccccggtacccagccagacctcctcctactcttgcatgctgcccacc
agtccatcggtgaatggacggagctatgatacatacacccctcctcacatgcagacacac
atgaacagccagcccatgggcacctctggcaccacttccacaggtctcatttcccctgga
gtgtcagttccagttcaagttcctggcagtgaacctgatatgtctcaatactggccaaga
ttacagtaa
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