Aphelocoma coerulescens (scrub jay): 138111154
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Entry
138111154 CDS
T10543
Symbol
TPCN2
Name
(RefSeq) two pore channel protein 2 isoform X1
KO
K14077
two pore calcium channel protein 2
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04020
Calcium signaling pathway
acoe04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
138111154 (TPCN2)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
138111154 (TPCN2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
acoe04040
]
138111154 (TPCN2)
Ion channels [BR:
acoe04040
]
Voltage-gated cation channels
Calcium channel, two-pore (TPC)
138111154 (TPCN2)
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Paralog
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Motif
Pfam:
Ion_trans
PKD_channel
YVC1_C
DUF1331
Motif
Other DBs
NCBI-GeneID:
138111154
NCBI-ProteinID:
XP_068872520
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Position
5:complement(4129881..4188916)
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AA seq
748 aa
AA seq
DB search
MEAGAEAEPLLPPRRWRAGRGLWRERGGARSAAEDGAGADNDLYINQAIVFIEDAIQYRS
INHRVDSKSLWLYRWYYSRTCQWILSLTITVILALAFIEEPSSLTVTSDVRYRLPAWNPP
CGLTESIELLCFLVFVVDVSVKSYLIGWKEFWKNKWLMAYILTLIVSLTDWIVSLSFFCK
ESVRIRRILRPFFLLQNSSMMKKTLKSINSTLPEMASVVLLLAVHLSLFTMFAMLLFART
KDNQQDKEWVVYFRNLPESLTSLLVLLTTANNPDVMIPAYSKNRAYSIFFILFTVLGNLF
LMNLLTAIIYNQFRGYLLKSVQSSLFRRRLGIRAAFEVLSSLKETPASAQQSCVSVGALL
QVLQKAEMDSRCKQAIMRSLKMCSCDQLSAAQFQKFFEELDKDAIKQHPPSPEYQSHFMQ
KMQFAFGHPYFGYLGNVVALANIISICVVLVMDADKQPSERDDFFLGAINCFFILYYLLE
MLLKILAMGLKRYLSYPSNRFDGLLTVILLILEIATFAVYGFPHPGWRPEFMGLLSLWDM
VRLVNMLIVFRFLRIIPNMKFMALVVTTLLDLVKNLRAFAGILVVVFYAFAITGIMLFQG
AVVPLGNTSAANTTNDNDTLQCGTYEQLEYWPNNFDDFAAAVVTLWDVMVVNNWQVFLDA
FSRYSSPWAKIYFVAWWLISSVIWVNLFVALLLENFIHKWDRRCQRESLSDIEYQRTVEL
MFRDVLEEPTEEELMEKLHQHPHLQLCR
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggaggccggtgctgaggcggagccgctgctgcccccgcggcgctggcgggcgggccgg
gggctgtggcgggagcgcggcggtgcccgctcggccgccgaggacggtgctggagctgat
aatgacctttatataaatcaagccatagtatttattgaagatgcaatacaatatcgatct
ataaatcaccgtgtggactccaaatccctgtggctttatcgatggtactattccaggact
tgccagtggattttgagcttaaccattactgtaatcttggctttggctttcattgaagaa
ccttcctcgctcaccgtcacgtcggatgtccggtaccgccttcctgcctggaatcctccc
tgtggcctcacggagagcattgagctgctctgcttccttgtcttcgtggttgatgtatct
gtgaagagttatttaattggatggaaagaattttggaaaaataaatggctaatggcttat
atactgacattaattgtttcccttactgattggattgtgtcactgagttttttctgcaaa
gagagtgtgagaataagaagaatccttcgccccttctttcttctccagaattcttctatg
atgaagaaaacgttaaaaagtatcaacagcacgttgcctgaaatggcgagtgttgttcta
ctgctggctgttcatttgtctctctttaccatgtttgccatgctgctctttgctcgaaca
aaggataaccagcaggataaggaatgggtggtgtatttccggaatttgccggaatccctg
acgtcactgctggtcttgctgactactgcaaataatcctgatgtgatgatacctgcatat
tctaagaatcgagcatattcaatcttcttcatcctcttcactgtattaggcaacttgttt
ttgatgaatttgcttacagcaataatatacaaccagtttcgagggtaccttctgaaatca
gttcagtcctccctcttcaggaggcggctgggaatccgggctgcgtttgaggtgctgtct
tccctgaaagagactcctgctagtgcacaacagtcctgtgtcagcgttggggccttatta
caggtgcttcagaaagctgagatggattctcgctgcaagcaagccatcatgagatcgctc
aaaatgtgctcctgtgaccagctgtcagctgcccagttccagaagttctttgaagaacta
gacaaagatgccattaagcaacaccctcccagtccagagtaccaatcccattttatgcag
aaaatgcagtttgcctttggccatccctactttggctacttggggaatgtggtagccctt
gcaaacattatttctatttgtgtggtcttggtgatggatgcagataagcagccatctgaa
agagatgacttcttcctgggggctatcaactgcttcttcatcctatactatctgctggaa
atgttgctgaaaatcttagcaatgggcttgaaaagatacttgtcttacccaagcaataga
tttgatggacttctgactgtaattttgctgatactggagattgcaacttttgctgtgtat
ggatttcctcaccctggctggagacctgagttcatgggcttgttgtccctgtgggatatg
gtgcgactggtgaacatgttgattgtgttcaggttcctgcggattatccccaacatgaag
ttcatggctttggttgttactacattgctggatctggtgaaaaacttaagagcctttgca
ggaatccttgtggtggttttctatgcatttgctataactggcataatgctatttcaaggt
gctgttgttcccttgggaaataccagtgctgccaacacaacaaatgacaatgacactctg
cagtgtgggacctacgaacagctggaatattggcccaacaacttcgatgatttcgctgca
gcagtggtaaccctgtgggatgtgatggtggtgaacaactggcaagtctttctggatgcg
ttttcaagatattcaagtccgtgggcaaagatctattttgtagcctggtggttgatctcc
tctgtcatctgggttaatctcttcgtagctttacttctggagaactttattcacaagtgg
gaccgtcgctgccagcgagagtctctttcagatattgaataccagaggacagttgaactc
atgttcagagatgttttggaagaacctacagaggaggagttgatggaaaaactgcaccag
cacccacacctgcagttatgtaggtga
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