Aphelocoma coerulescens (scrub jay): 138111449
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Entry
138111449 CDS
T10543
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03420
Nucleotide excision repair
acoe04115
p53 signaling pathway
acoe04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138111449 (DDB2)
09124 Replication and repair
03420 Nucleotide excision repair
138111449 (DDB2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
138111449 (DDB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acoe04121
]
138111449 (DDB2)
03400 DNA repair and recombination proteins [BR:
acoe03400
]
138111449 (DDB2)
Ubiquitin system [BR:
acoe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
138111449 (DDB2)
DNA repair and recombination proteins [BR:
acoe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
138111449 (DDB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
WD40_RFWD3
PEP5_VPS11_N
Frtz
Motif
Other DBs
NCBI-GeneID:
138111449
NCBI-ProteinID:
XP_068873371
LinkDB
All DBs
Position
5:complement(27739279..27752906)
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AA seq
464 aa
AA seq
DB search
MAPVNQPKDKKRERACQHWPEEAKSAGKRKRDYGERGNDKQEKRLFVRKTSKPSGKIAGC
SGGGFVMRNKRVLSSQLERRCSIVHYVYQKMLGGSIQAQLRQRLELAFLRYLSSYCLFRR
ASPFDRRVTCLEWHPTHPSTLAVGSKGGDIILWDCEVLAKTCFIKGKGPGDSLGDIKFSP
YEAEKLYVASGDGTLSLQDLEGRAVQVISRALDCGHEHHNVCCWYCSVDVSASCHAVVTG
DNVGNVVLLSTSGEEIWKLKLHRKKVTHVEFNSRCEWMFATASVDQTVKIWDLRNIKNKT
NFLHLLPHEKPVNAAYFSPTHGAKLLTTDQHNEIRVYSSSDWTKPLHLIPHPHRQFQHLT
PIKATWHPRYDLIVVGRYPDPKFPGYTPSELRTVDVFDGNTGEMVCQLYDPNASGIISLN
KFNPMGDTLASGMGFNILIWNQEEMAAKKHEHLLKAMTDKEIEP
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggctccagtgaaccagccaaaggacaagaagcgtgagagggcatgtcagcattggcca
gaagaggcaaaatcagctgggaagaggaagcgggactatggggaacgagggaatgataaa
caagaaaagaggttgtttgtgagaaaaacatctaaaccatcagggaaaatcgcaggttgc
agtggaggtgggtttgtgatgagaaacaagagagtcctttcctctcagctggagcggcgg
tgcagcattgttcattatgtctaccagaaaatgctgggaggctccattcaggcacagctc
aggcagagactggaactggcttttctacgttatctttcctcatactgcctctttcgaaga
gcaagtccctttgacaggagagtgacatgcctggaatggcacccaacacaccccagtaca
ctagctgtcggttccaaaggtggagacatcatcctttgggactgtgaagtccttgctaaa
acctgcttcataaaggggaaagggccaggagattctctcggagacatcaagttcagtcct
tatgaggcagagaagctttatgtggcatcaggtgatggcaccttaagtctgcaggatctt
gagggcagagcggtgcaggtgatctctcgtgccctggactgtggccatgagcatcataat
gtttgttgctggtactgcagtgtggatgtttctgcaagctgccatgcagtggtgacaggt
gataatgtgggcaacgtggtcctgctcagcacttccggtgaagagatctggaagctgaaa
ttgcacaggaagaaagtgactcatgtagagtttaactcccgatgtgagtggatgtttgcc
acagcatctgtggatcagacagtcaaaatctgggacctcagaaacatcaaaaacaaaaca
aactttcttcatctgcttccacatgagaaacctgtcaatgcagcttacttcagcccaaca
catggtgccaagcttttgaccacagaccagcacaatgaaatcagggtttactcatcttca
gactggaccaagccactgcatctgattccacatccacataggcagtttcagcacctcaca
cctattaaggcaacgtggcatcctcgctatgacctcattgtggtaggtcgctacccagac
cccaagttccccgggtacacgccgagcgagctgcggactgtggacgtgtttgatggaaac
acgggcgagatggtttgtcagctctacgatccaaatgcttctggcatcatctcgctcaat
aaatttaaccctatgggagacacactggcttctggcatgggctttaatattctgatctgg
aaccaagaggagatggcggccaagaagcacgaacatctcttgaaagccatgacagacaag
gagattgaaccatga
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