Aphelocoma coerulescens (scrub jay): 138111459
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Entry
138111459 CDS
T10543
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04136
Autophagy - other
acoe04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138111459 (ATG13)
04136 Autophagy - other
138111459 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acoe04131
]
138111459 (ATG13)
03029 Mitochondrial biogenesis [BR:
acoe03029
]
138111459 (ATG13)
Membrane trafficking [BR:
acoe04131
]
Autophagy
Autophagosome formation proteins
ULK complex
138111459 (ATG13)
Atg1 complex
138111459 (ATG13)
Mitochondrial biogenesis [BR:
acoe03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
138111459 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
138111459
NCBI-ProteinID:
XP_068873400
LinkDB
All DBs
Position
5:complement(28082352..28107079)
Genome browser
AA seq
549 aa
AA seq
DB search
MDTDLSSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRAGEDNGVV
YPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHFQTPPPVVTDTLKVPVMGLAFSHQLSSSR
LSYQPAALGVGSADMGCPVLFAGGLNAAHPHQLIGPGKEGGVPPVPSQPAHGTQADQERM
CTPLDGIHYSAATPSSSEDTETVSNSSEGKCGSPHDLLETIFIRKVGAFVNKPINQVTMA
NLDIPFAMFAPKNVELEDNDPMVNPPESPETESPLQGSLHSEGSSGSSTGNTHDDFVMID
FKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVKE
FDAFVETLQ
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggacactgatctcagttcccaggacaggaaggacctggacaagttcatcaaatttttt
gctttaaagacagtacaagtaattgtccaggcccgacttggagagaaaatctgtacccgc
tcatcatcctccccaacaggttctgactggttcaatttggcaatcaaagatataccagag
gttactcatgaagcaaagaaagccctggcaggacagctgcccgctgttggacggtctatg
tgcgtggagatttctctcaaaacctcagagggggactccatggagctggaaatttggtgt
ctagaaatgaatgaaaagtgtgacaaagaaatcaaagtttcatacactgtatacaacagg
ctgtctctactgctgaagtctttgcttgctataaccagagtaactccagcctacagactc
tcaaggaaacaaggccatgaatatgtaatattgtacaggatatattttggtgaagtgcaa
ctgagtggcttgggagaaggtttccagacagtccgtgttgggacagtgggtaccccagtg
ggcaccatcactttgtcttgtgcctacagaatcaaccttgctttcatgtcaaccaggcag
tttgagaggacccctcctatcatggggattataattgatcattttgtggaccgtccctat
cccagctcttcacccatgcatccctgcaattacagagctggtgaggacaatggtgtagta
tacccctcagtagaagattcccaagaagtgtgtaccacatctttttccacctctcctcca
tctcagtgtgtttttactgtcacaaaggcacattttcagacccctcctcctgtggtgacg
gacaccttgaaggtcccagtgatgggactagccttttcacatcaactttccagctctcgt
ctttcctatcagcctgctgccctgggagttggatcagctgacatggggtgtcctgtactc
tttgctggtggcttgaatgctgcacaccctcaccagttgattggtccaggcaaagaaggg
ggagttcccccagttcctagccagccagcacatggcactcaagctgaccaagagaggatg
tgcaccccactggatggaatccattactcagcagctactccttctagtagtgaggacaca
gaaacagtatccaacagcagtgaaggaaagtgtggctccccccatgaccttttggagacc
atctttatccggaaggtgggagcttttgtcaacaaacccattaaccaggtgaccatggcc
aacttagacattccttttgccatgtttgctcccaagaatgttgagctggaagataacgac
cccatggtcaatcctcctgaatccccagaaactgaatctcctctacaaggcagcttacac
tcggagggctccagtggcagcagcacagggaacacccatgatgactttgttatgatcgac
tttaaaccagcattttcaaaagatgacattcttccaatggacctggggacattttaccgt
gagtttcagaatccccctcaactcagcagcctctcgattgacattggagcacagtccatg
gcagaggatttggactcattaccagagaagctggcagtccacgagaaaaacgtcaaagaa
tttgatgctttcgtggaaaccttgcagtga
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