Aphelocoma coerulescens (scrub jay): 138111461
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Entry
138111461 CDS
T10543
Symbol
HARBI1
Name
(RefSeq) putative nuclease HARBI1
KO
K23222
nuclease HARBI1 [EC:3.1.-.-]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acoe03036
]
138111461 (HARBI1)
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Gene silencing
Transposable elements
138111461 (HARBI1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_4
Plant_tran
DDE_Tnp_1
Gag_spuma_N
Motif
Other DBs
NCBI-GeneID:
138111461
NCBI-ProteinID:
XP_068873413
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Position
5:28107096..28109120
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AA seq
348 aa
AA seq
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MAVPIAVLDCDLLLYGRGHRTLDRFKLEDVTDEYLVSTYGFPRQFIYYLVDLLGATLSRP
TQRSRAISPETQILAALGFYTSGSFQTRMGDTIGISQASMSRCVANVTEALVERASQFIH
FPEDEATVQTLKDDFYGLAGMPGVLGVVDCTHVAIKAPNAEDLSYVNRKGLHSLNCLMVC
DSRGVLLSAETHWPGSLPDCTVLEQAALTSQFETELHKDGWLLGDSSFLLRTWLMTPLHI
PETPAEYRYNMAHSATHNVIERTFRTIRSRFRCLDGSKGTLQYSPEKSSHIILACCVLHN
ISLEHGLDVWSSPATGHVEQPEEEYEQMESVNSEACRVRQELLLTHFS
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggccgtacctatcgcggttcttgactgcgacctcttgctctatggccgcggacacagg
actttggatcgcttcaagctggaggatgtcacggatgagtatctagtatccacgtacggc
tttccccgacagttcatttactacctggtggatctcctgggagccactctctcacgccct
acacagcggtccagggccatcagtccagagacgcaaatacttgctgcgctgggtttttat
acctctggctccttccagactcgcatgggggatactattggcattagccaagcctcgatg
agccgctgtgttgccaatgtgaccgaggcactggtggaaagagcctcacagttcattcac
tttcctgaggatgaagctactgtacagaccctgaaggatgacttttatgggctagcagga
atgccgggagtgctgggcgtggttgactgcacccatgtggcaatcaaagcgccaaatgct
gaggatctgtcctatgtgaaccgaaagggtcttcattccctaaactgcctcatggtgtgt
gattccagaggagtcctccttagtgctgaaacgcactggccaggcagcctgcctgactgc
acggttttagagcaggcagccctcacaagccagtttgaaactgaactacataaagatggc
tggctacttggtgacagctccttcttgctccggacgtggttgatgacccctctgcacatc
cccgagacgcctgcagagtaccgctacaacatggcccattccgccactcacaacgtcatt
gagcgcacgttcagaaccattcggtcgcggttccgctgcctcgatgggtccaaaggcacc
ctgcagtattctccagagaagtccagccacatcattctggcctgctgcgtgcttcataac
atctccctggaacatggactggatgtgtggtcttcaccagccacaggacacgtggaacaa
ccggaagaagagtacgagcaaatggaatcagtgaactcggaagcctgtcgtgttcgtcag
gaacttctccttactcattttagctaa
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