Aphelocoma coerulescens (scrub jay): 138111509 Help Entry 138111509         CDS       T10543                                  Symbol VPS39 Name (RefSeq) vam6/Vps39-like protein   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism acoe  Aphelocoma coerulescens (scrub jay) Pathway acoe04140   Autophagy - animal acoe04148   Efferocytosis acoe05132   Salmonella infection Brite KEGG Orthology (KO) [BR:acoe00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     138111509 (VPS39)    04148 Efferocytosis     138111509 (VPS39)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     138111509 (VPS39)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:acoe04131]     138111509 (VPS39) Membrane trafficking [BR:acoe04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     138111509 (VPS39) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C TPR_Vps41 Clathrin Beta-prop_RIG_2nd Lgl_C SAM_CEP-1_C EcoR124_C Motif Other DBs NCBI-GeneID:  138111509 NCBI-ProteinID:  XP_068873531 LinkDB All DBs Position 5:complement(30514044..30539374) Genome browser AA seq 875 aa AA seqDB search MHDAFEHVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIKKDVGCNRFEVTLEKSNK NFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTISKAKGASLFTCDLQQSDTGE EVLRMCVAVRKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVD GKGSIKELFPTGKQLEPLVAPVADGKVAVGQDDLTVVLNEEGVCTQKCALNWTDIPIAME HQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGTNIIYVASNHFVWRLIPVSI ATQIQQLLQDKQFELALQLAEMKDDSDSEKRQQIHHIKNLFAFNLFCQKRFDESMQVFAK LGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPGLSGAELEKAHLALIDYLTQKRSQLVKKL NDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEE SEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTENL HLVFSYSVWVLRDFPEDGLKIFTEDLPEVEALPRDKVLSFLVENFKSLAIPYLEHIIHVW EETGADFHNCLIQLYCEKVQGLMKEYLSSFPADRAPVPAGEEGGDLGDYRKKLLLFLEKS SWYEPSRLISDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTNMAENYCHKHYDRNK DGNKDVYLSLLRMYLSPPSVHCLGPIKMEVLEPQANLQAALQVLELHHSKLDTTKAINLL PANTQISEIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKV CTVCKKKIGNSAFARYPNAIVVHYFCSKEVNTLDT NT seq 2628 nt NT seq  +upstreamnt  +downstreamnt atgcacgacgccttcgagcatgtgccgatcctggagaagctgccgctacagatcgactgc ctggcggcctgggaggaatggctccttgttggtaccaaacaagggcatcttctgctttac aggatcaagaaagatgtaggttgcaataggtttgaagtgacactagagaaatccaataag aacttctcaaagaagattcaacagatccatgttgtttctcaatttaaaattttggtcagt ctattagaaaataacatttacgtccatgacctgttgacatttcaacaaatcaccacaatt tccaaggcaaaaggtgcatctctcttcacttgtgatctccagcaatcagatacaggggaa gaggtgctgagaatgtgtgtggccgtgcgtaagaagctacagctttatttttggaaggac agagagttccatgaactacagggggacttcagtgtacctgatgtacctaagtctatggcc tggtgtgaaaactccatctgtgtaggcttcaagagggactattacctgatacgggtggat ggaaaaggatctatcaaagaactgtttcccacagggaagcagctggaaccattggtagct cctgtagcagatggaaaagttgcagttggccaagatgatctaacagttgtgcttaatgaa gaaggggtctgtactcagaaatgtgccttgaattggacagatattcctatagccatggaa caccagcctccctacatcattgctgttctgccaaggtacgtggagatccgcactttcgaa ccccggctgctggtgcagagcatcgagctgcagaggccacgcttcatcacctctggaggc acaaacattatatatgtggcaagtaatcactttgtttggaggctcattccagtgtccata gccacacagatccagcagcttctgcaggacaaacagtttgagttggctttgcagttggca gaaatgaaagatgattcagatagtgagaagcgacaacaaattcaccacataaagaacctc tttgccttcaaccttttctgccagaagcgttttgatgaatccatgcaagtttttgccaag cttggtacagatcccactcatgtgatgggtctgtatcctgacctcctgcccacagattac aggaaacagctacagtatcccaaccccctgccagggctttctggggcagagctggagaag gcacatttagctctgatagactacctaactcaaaaaaggagtcagctagtgaagaagcta aatgattctgatcatcagtccagtacctcacccctcatggaaggaacacccacgatcaaa tccaaaaagaagctgctacaaatcattgataccactctgttaaagtgttacctgcataca aatgtagcactggtggccccactgctacgtctggagaacaatcactgccatattgaggag agtgagcatgtgctgaagaaggcacacaaatatagtgagctgataatactgtatgagaaa aaaggtctgcatgagaaagcattacaggtactggtggatcagtcaaagaaagccaactcg cctttgaagggtcatgagaggacagtgcaatatctgcagcatttgggcacagagaacttg catttggtattttcctactctgtctgggtgctgagagattttcctgaagatggactgaag atatttacagaagacctccctgaagtggaagctttgccacgcgacaaagtgctcagtttc ttggtagaaaattttaaaagcttggctattccttacctggaacacatcattcatgtctgg gaagaaaccggtgcggactttcacaactgtctgatccagctgtactgtgagaaagttcag ggcttaatgaaagaatatctcagttctttccctgcagatagagctccagtgcctgctggg gaggaaggaggagacttgggggattaccggaaaaagctgcttctttttctggagaagtct agctggtatgaacctagtcgacttattagtgacttcccctttgatggtctcctagaagaa cgtgctctgctcttgggtcgtatggggaagcatgagcaagctctgtttatttatgttcat attttgaaggacaccaatatggctgaaaactactgccataaacattatgacagaaacaaa gatggcaacaaagatgtctatctgtccctgctccgcatgtatctctccccacccagtgtt cattgcctgggaccgatcaagatggaagtgctggagcctcaagccaatctgcaggctgct ctgcaggttttggaactgcaccacagcaaattggataccactaaggctataaacctactc ccagcaaatacacagattagtgagattcgcatcttcttagagaaagtccttgaagaaaat gctcagaagaaaagatttaatcaagtgctcaagaatcttctccatgcagagtttctgagg gtccaggaagagcggatcttacatcagcaagtaaagtgcattattacagaggagaaggtg tgcactgtttgtaaaaagaagataggtaacagtgcatttgctcgataccctaatgcaata gttgtgcattatttctgctccaaagaagtcaacacactggacacctga

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