Aphelocoma coerulescens (scrub jay): 138111583
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Entry
138111583 CDS
T10543
Symbol
VTI1B
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
138111583 (VTI1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acoe04131
]
138111583 (VTI1B)
Membrane trafficking [BR:
acoe04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
138111583 (VTI1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
V-SNARE
Sec20
Laminin_II
WXG100
Snapin_Pallidin
Fusion_gly
DUF4407
DUF3958
KxDL
RSS_P20
Motif
Other DBs
NCBI-GeneID:
138111583
NCBI-ProteinID:
XP_068873749
LinkDB
All DBs
Position
5:complement(34202874..34215452)
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AA seq
232 aa
AA seq
DB search
MAGRGSASSEHLERLHEIFRGLHGHLRGVPERLRGSAAEEKKKLVREFDEKQREANETLR
EMEEELKYAPVPFRNQMMSKIRAYRRDLSMFQREMRSTDLGLGRGNQGDTKYGIFATENE
QSTNLQSQRVLLLQGTDSLNRASESIERSHRIAAETDQIGTDIIEELGEQREQLERTKSR
LVNTSENLSKSRKILRSMSRRVTTNKLLLSIIIILELAILGGVVYFKFFRKK
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggctggccgcgggtccgcgtcttcggagcacctggagcggctgcacgagatcttccgc
ggcctgcacggacacctgcggggcgtccccgagcggctgcggggtagcgcggccgaggag
aagaaaaaactggttcgagaatttgatgagaagcagcgtgaagctaatgagacgctgcgg
gagatggaggaagaactgaagtacgctcctgtgcctttccgcaaccaaatgatgagcaaa
atacgagcatacagaagagacctgtccatgttccagagagagatgagaagcacagatttg
ggattgggccgtggaaaccaaggcgatacaaaatacggaatcttcgccacagaaaatgaa
cagagtactaatctgcagtcacagagggtgctgcttctccagggcacagacagtctgaac
cgagccagcgagagcatcgagcgctcgcaccgaattgctgctgagactgatcagattggc
actgatataatcgaagaacttggggagcagcgggagcaactggaacgcaccaagagcagg
ttggtgaatacaagtgagaacttgagcaagagccgcaagattctacgttcgatgtccagg
agagtaaccactaataagttgttgctgtcaattatcatcatcctggaactggccatccta
ggaggtgtggtctacttcaagttctttcgcaagaaatga
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