Aphelocoma coerulescens (scrub jay): 138111643
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Entry
138111643 CDS
T10543
Symbol
NPAS3
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoe03000
]
138111643 (NPAS3)
Transcription factors [BR:
acoe03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
138111643 (NPAS3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HLH
bHLH_NPAS4
DUF7510
Motif
Other DBs
NCBI-GeneID:
138111643
NCBI-ProteinID:
XP_068873885
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All DBs
Position
5:41080618..41680034
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AA seq
895 aa
AA seq
DB search
MAPTKPSFQQDPSRRERLQALRKEKSRDAARSRRGKENFEFYELAKLLPLPAAITSQLDK
ASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKGIQMWKSEVCMRKTPCEVIGAQ
RRRSPSALAIEVFESHLGSHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGSS
VFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPVESTNPSLL
TTDNTLERSFFIRMKSTLTKRGVHIKSSGYKVIHITGRLRLRVSLSHGRTVPSQIMGLVV
VAHALPPPTINEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAE
DVEGIRHSHLDLLNKGQCVTKYYRWMQKNGGYIWIQSSATIAVNAKNASEKNIIWVNYLL
SNPEYKDTPMDIAQLPHLPEKTSESSETSDSESDSKDNSEDNENSKSDEKGNQSENSEDP
ESDRKKSGNQSDNEMNCNDDGNSSSNQDSRDSDDSFENSDFENQKAPEDSFGTLGSMQIK
VERYVESESDLRLQNCESLTSDSAKDSDSAGEVNAQSSSKHQKRKKRRKKQKGGSMTRRR
LSSTSSPNGLDSALVDQPQLLSSPNSASVLKIKTEISEPINFDNDSSIWNYPPNREISRN
ESPYSMTKPPSSEHFPSPQASSSLHVSIPDSVLTPPGTENTASRKTQFSTSSNSALAPVS
SDPLSPPLSASPRDKHPGGPTTSNSLLYTGDLEALQRLQAGNVVLPLVHRVTGTLAATST
AAQRVYTTGTIRYAPAEVTLAMQGNLLPNTHAVNFVDVNSPSFGLDPKTPMEMLYHHVHR
LNMSGPFGSAVSGASLTQMPAGNVFTTAEGLFSTLPFPVYSNGIHTTQTLERKED
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaccaagccaagctttcagcaggatccttccaggcgagaacgtttacaagct
ttgaggaaggaaaagtcccgagatgctgctcgctctcgccggggaaaggagaattttgaa
ttctatgagttggcaaagttgttgccactgcctgcagccattaccagccagcttgacaag
gcatccatcatccgacttacaattagctatctgaaaatgagggactttgctaatcaaggt
gatcctccatggaacttgaggatggaaggacctccacctaatacatcagtaaaagggatt
caaatgtggaaatctgaggtctgcatgagaaagacaccatgtgaagttataggtgcccag
cgcaggagaagtcccagtgcccttgccattgaagtttttgaatcacatttgggaagtcat
attttacagtccctggatggatttgtatttgcactaaatcaagaaggaaaatttttgtac
atttcagaaactgtctccatctatttaggcctgtcccaagtggaactgacaggcagcagt
gtgtttgactacgtccacccaggagaccatgtggagatggcagagcagctgggcatgaag
cttcccccggggcgaggccttctctcacagggtacagcagaggatggagccagctcagca
tcctcatcttcccagtccgagacccctgagccagtggaatctacaaaccccagtttacta
accactgacaacactctagagcgctcttttttcatccgaatgaaatctacactgaccaag
cgaggagtgcacatcaaatcatcaggatacaaggtgattcatataacaggccggttgcgt
ctgagagtatcactgtcacacggacggacagtacccagccaaatcatgggacttgttgtc
gttgctcatgctttgccacctcctacaattaatgaagtcaggattgactgccacatgttt
gtcactcgtgtgaatatggacctcaatatcatttactgtgaaaataggattagtgattac
atggatctgacccctgtagatatcgtaggaaagagatgttaccacttcattcatgctgaa
gatgtagaaggcatcagacatagtcacttagacttgctgaataagggtcaatgtgtaaca
aagtattaccgctggatgcagaagaatggaggttatatctggatacaatctagtgcaacc
atagctgtcaacgccaagaacgcaagcgagaagaatatcatttgggtcaattacctcctt
agtaacccagagtacaaggacactccaatggatattgcacaacttcctcatctgccagag
aaaacctcagaatcctcggagacctctgactcggaatcggactcaaaggacaactcagag
gacaatgagaactcaaagtcagatgagaaaggaaaccagtcagaaaacagtgaagaccct
gaatccgacaggaaaaagtcaggaaatcagtcagataatgaaatgaactgtaatgatgat
gggaacagctccagcaaccaggacagcagggacagtgatgacagctttgaaaactcagac
ttcgagaatcaaaaggcccctgaggacagttttggcactcttggctctatgcagatcaag
gtggagcgctatgttgagagtgagtcagacttgcggttgcagaactgtgaatcgctgacc
tccgacagtgccaaggactcagacagtgcaggtgaagtaaatgcccagtcttccagcaaa
catcagaagaggaagaagaggagaaaaaagcaaaaaggaggcagcatgacccggagaagg
ctgtcaagcacctcaagtccaaatggacttgactcagctttggtggaccagccccagctg
ctctcgtcaccaaacagtgcctcagtgctcaaaattaaaacagaaatctcagaacctatc
aattttgataatgatagcagtatttggaattacccacccaacagggaaatctcaaggaat
gaatcaccctacagtatgaccaagccccccagttccgagcacttcccttccccccaagcc
agcagtagtttacatgtctccattccagactctgttctcaccccaccggggactgaaaat
actgccagccgtaaaactcagttcagcacctcatccaactcggccttggctccagtgtcc
tctgaccctttgtcacccccactttcagcatctccaagggacaaacatccaggaggtccc
acaacttccaactctttgttgtacactggggacctggaagcccttcagaggttacaagca
ggcaatgtggtgcttcctttggttcacagggtaacgggaacccttgctgcgaccagcact
gctgctcagagggtctacaccactggcactattcggtatgctccagctgaagttacctta
gccatgcagggcaacctcctccccaatacccatgctgttaactttgttgatgttaacagc
cccagctttggtctggatcctaaaacaccgatggaaatgctctaccaccacgttcaccga
ctcaatatgtcgggaccatttggaagtgctgtgagcggggccagtctgacccaaatgcct
gcagggaatgtgttcacaactgccgaaggacttttttccactcttccatttcctgtgtac
agcaatggcattcacactacacagactctggaacggaaagaggattga
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