Aphelocoma coerulescens (scrub jay): 138111719
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Entry
138111719 CDS
T10543
Symbol
IRF2BPL
Name
(RefSeq) probable E3 ubiquitin-protein ligase IRF2BPL
KO
K22383
interferon regulatory factor 2-binding protein
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoe03000
]
138111719 (IRF2BPL)
04121 Ubiquitin system [BR:
acoe04121
]
138111719 (IRF2BPL)
Transcription factors [BR:
acoe03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
138111719 (IRF2BPL)
Ubiquitin system [BR:
acoe04121
]
Ubiquitin ligases (E3)
Atypical E3
138111719 (IRF2BPL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
DUF7623
Motif
Other DBs
NCBI-GeneID:
138111719
NCBI-ProteinID:
XP_068874053
LinkDB
All DBs
Position
5:complement(45383970..45387114)
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AA seq
737 aa
AA seq
DB search
MSAAQVSSSRRQSCYLCDLPRMPWAMIWDFTEPVCRGCVNYEGADRIEFVIETARQLKRA
HGCFQDGRSPGPPPPVGVKAVTLSAKEAAAAAAQQQLNHVDATSKAASAGLTQSSLDRYG
LSAAAAEQRSRFEYPPPPGSLGSSHGARLPNGLGGPNGFPKPPEDGPPELNRQSPNSSSS
SSSSRRGAHGGLVSGLPPGAAGAQMNVPPNLLPQTLLNGPAASGVALPPPHGGLSGRGGG
GPPAPSASSQGGTCGGGAGGGGGSSSEACGKRPGSVSSSDQERELKEKQRNAEALAELSE
SLRNRAEEWASKPKIVRDTLLTLAGCTPYEVRFKKDHALLGRVFAFDAVSKPGMDYELKL
FIEYPSGSGTVFSSASGVAKQMYQDCMKDFGRGLSSGFKYLEYEKKHGSGDWRLLGDLLP
ESVRFFKELVGADMLPQPYLDASCPMLPTALVSLPRPGAGAGGAQGTAAASRGPGGGGGG
GGGGAMRKRKASPEPSDSAEGALKLSDEQQRQQWMASQSEALKLTMSAGGFGAVHGGGPP
PPPPLGPHSNRTTPPESAPQNGQSPMAALMSVADTLGNAHSPKDGSSVHSTTSTRRNSSS
PVSPASVPGQRRLASRNGDMNLQVAPPPPSTHPAMDQVHPQNIPDSPMANSGPLCCTICH
ERLEDTHFVQCPSVPSHKFCFPCSRESIKAQGATGEVYCPSGEKCPLVGSNVPWAFMQGE
IATILAGDVKVKKERDP
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgcgcaggtgtcctcgtcgcggaggcagtcatgctacctatgcgatctgcct
cgcatgccctgggccatgatctgggacttcacggagcccgtctgccggggctgcgttaat
tacgagggggccgaccgcatcgagttcgtgatcgagacggcccggcagttgaagcgggct
cacggctgcttccaagacggtcgctccccgggccccccgccgccggtcggagtgaaggca
gtgacgctctccgccaaggaagcggcggcggcggcggcccagcagcagctcaaccatgtg
gatgccacctccaaggcagcctcggcgggactgacccagtcgagcctggaccgctacggg
ctcagcgccgccgcggcggagcagcgcagccgcttcgagtacccgccgccgccaggcagc
ctgggcagcagccatggcgcccgcctgcccaacgggctgggggggcccaatggcttcccc
aagccgcctgaggacgggccgccggagctgaaccggcagagccctaactcctcctcctcc
tcttcctcctcccgtcgcggggcgcacggggggctcgtgtctggcctgcctccgggggcc
gccggcgctcagatgaacgtgccccccaacctgctgccgcagacgctgctgaacggcccc
gccgcctccggcgtggcgctgcctccgccgcacgggggcctgagcggccgcggcggcgga
ggtccccccgctccctctgcctcttcccaagggggcacctgcggcggcggtgccggggga
ggcggcggctcgtcctccgaggcctgcggcaagcggccgggctcggtatccagcagtgac
caagagcgggagctgaaggagaagcagcgcaacgcggaggcgctggccgagctcagcgag
agtttgcggaatcgggccgaggagtgggccagcaagcccaagatcgtgcgggacacgctg
ctcactctggccggctgcacgccctacgaggtgcgcttcaagaaggatcacgccctgctg
ggccgcgtctttgccttcgacgccgtctccaagccgggcatggactatgagctgaagctc
ttcatcgagtaccccagcggctccggcaccgtcttttccagcgcctccggcgtggccaag
cagatgtaccaggactgtatgaaggacttcggccgcggcctctcctcgggcttcaagtac
ctggagtacgagaagaagcacggctctggcgactggcggctcctgggggacctgctgccc
gagtctgtgcgcttcttcaaggagctggtgggcgccgacatgctgccgcagccctacctg
gacgccagctgccccatgctgcccacggcgctggtgagtctcccgcggccgggggccggg
gccggcggggcgcagggcacggccgccgcctctaggggacctggcggtggcggcggcggc
ggcggcggcggggcgatgcgcaagaggaaagcctctcctgagccctcggactcggccgag
ggggctctgaagctcagcgacgagcagcagcggcagcagtggatggccagccagagcgaa
gcgctcaagctcaccatgtcggccgggggcttcggggcggtgcacggcgggggccccccg
ccgccgccgcccctcgggcctcactccaaccggaccacgccacccgagtccgccccccag
aacggacagtcccccatggccgcgctcatgtcggtggccgacacactgggcaatgcccac
tcgcccaaggacggcagctcggtgcactccaccacgtccacccgcaggaacagcagcagc
cccgtgtcgccggcctcggtgccgggccagcgccgtctggcctcccgcaacggggacatg
aacctgcaagtggcccctcctccccccagcacccaccccgccatggaccaagtgcacccc
caaaacattccggactctcccatggccaacagtgggcccctgtgctgcaccatttgccac
gaacgcttggaggacacccactttgttcagtgcccctctgtgcccagccacaagttctgc
ttcccttgttcaagagagagcatcaaggcccaaggggcgactggcgaagtctactgcccc
agtggagagaaatgccctctagtcggttccaacgtgccttgggcatttatgcagggcgag
atcgcgaccattttagctggggacgttaaagtgaaaaaggagagagacccttga
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