Aphelocoma coerulescens (scrub jay): 138111825
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Entry
138111825 CDS
T10543
Symbol
PAPOLA
Name
(RefSeq) poly(A) polymerase alpha isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138111825 (PAPOLA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoe03019
]
138111825 (PAPOLA)
Enzymes [BR:
acoe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
138111825 (PAPOLA)
Messenger RNA biogenesis [BR:
acoe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
138111825 (PAPOLA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
DUF4269
Motif
Other DBs
NCBI-GeneID:
138111825
NCBI-ProteinID:
XP_068874318
LinkDB
All DBs
Position
5:53797728..53841846
Genome browser
AA seq
739 aa
AA seq
DB search
MPFPVTTQGSQTQQLQKHYGITSPISLAAPKEFDCMLTQKLIETLKPYGVFEEEEELQRR
ILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAP
RHVERSDFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPED
LDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNIL
GFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWD
PRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKL
FEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSF
PAPKENPDKEEYRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDM
KIAARHVKRKQLHQLLPNHVLQKKKKHSTEGIRLTALNDSSLDLSMDSDNSTSVPSPTSA
MKTSPLNSSGSSQGRSSPAPAVTAASVTNTQASEVTVPQINSSESSGGTSNESIPQTATQ
PAISPPPKPTISRIVPSAYLLNPSPRSSGNVATKMPSPVAAVKRTSSPHKEESPKKIKIE
EQDEISEDTSCIDLNEHEKMETKEQIETEVNVNSQTETLQTTSLQAPQKTPSTDLSDIPA
LPANPIPVIKNSIKLRLNR
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttcccgttacaacccagggatcacaaacacagcagctacagaagcattatggc
attacctcaccaatcagtttagctgcccccaaggagtttgactgcatgcttacccagaaa
ttaattgaaacccttaaaccttatggcgtatttgaagaggaagaagagctgcaacgcagg
attctaattttgggaaaattaaataacttggtaaaggaatggatacgggaaatcagtgaa
agcaagaatcttccgcaatctgtaatagaaaacgttggaggaaaaatttttacgtttgga
tcctatagattaggggttcatacaaaaggtgctgatattgatgccctctgtgttgcacca
agacatgttgaaagaagtgattttttcacatcattttatgaaaaattaaaacaacaagaa
gaggtgaaagatctgagggctgttgaagaagcttttgtcccagttattaaactttgtttt
gatggaatagagattgatattttgtttgcaagattagcactgcaaactattcctgaggac
ttagatctacgagacgacagcctacttaaaaatttagacattagatgcatacgaagtctt
aatggttgccgcgtaaccgatgaaattctgcatctagtaccaaacattgacaacttcagg
ttaacactgagagctatcaaattgtgggcaaaacgccacaacatctattccaatatacta
ggtttccttggcggtgtttcctgggctatgctagtagcaagaacttgccagctttatcca
aatgcaatagcatcaactcttgtacataaatttttcttggtattttctaaatgggaatgg
ccaaatccagtgctattgaaacagccagaagaatgcaatcttaatttgcctgtatgggac
ccaagggtaaaccccagtgataggtaccatcttatgcctataattacaccagcataccca
cagcagaactctacgtacaatgtgtccgtttccacacggatggtcatggttgaggaattt
aagcaaggtcttgctatcacagatgaaattttgctgagtaaggcagagtggtccaaactt
tttgaagctccaaacttctttcagaagtacaagcattatattgtacttctagcaagcgca
ccgacagaaaaacagcgactagaatgggtgggcttggtggaatcaaaaatccgtattcta
gttggaaacctggagaagaatgaattcattacactggctcatgtgaatccacagtcattc
ccagcacccaaggagaatcctgacaaggaagaataccgtacaatgtgggtgattgggttg
gtgtttaagaaaactgaaaactctgaaaatttaagtgttgatcttacctacgacattcag
tcttttacagacacagtttataggcaagcaataaacagcaagatgtttgagatggatatg
aagattgctgcaaggcatgtgaaacgtaagcaacttcaccaactactacctaatcacgtg
cttcagaaaaagaaaaagcactcgacagaagggatcaggttgactgctctgaatgacagc
agcctagacttgtctatggacagtgataacagcacgtctgtgccttcgcctaccagtgct
atgaagacgagtccgttgaacagttccggaagttctcagggcagaagcagtcctgcgcca
gctgtaacagcagcatctgtgaccaacacacaggcttctgaagtcactgtgccacaaata
aattccagtgaaagctcagggggtacttcaaatgaaagcattcctcaaactgccacacaa
ccagccatttctccaccaccaaagcctaccatctctagaattgttccctcagcgtatcta
ttaaatccatcaccaagaagttcaggaaatgttgcaacaaaaatgcctagccctgtcgca
gcagtgaaaaggacatcttctccccataaagaagagtctcctaagaaaattaaaattgaa
gagcaggatgaaataagtgaagatactagctgtatagatttgaatgaacatgaaaaaatg
gaaactaaggagcaaattgagacagaagtgaatgttaattctcaaacagaaactcttcag
acaacttctctgcaagctcctcagaaaacacccagtacagacctttcagatatccctgct
cttcctgcaaatcctattcctgttatcaagaattcaataaaattgagattgaaccggtaa
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