Aphelocoma coerulescens (scrub jay): 138111943 Help Entry 138111943         CDS       T10543                                  Symbol HIF1A Name (RefSeq) hypoxia-inducible factor 1-alpha   KO K08268   hypoxia-inducible factor 1 alpha Organism acoe  Aphelocoma coerulescens (scrub jay) Pathway acoe04137   Mitophagy - animal acoe04140   Autophagy - animal acoe04148   Efferocytosis Brite KEGG Orthology (KO) [BR:acoe00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     138111943 (HIF1A)    04137 Mitophagy - animal     138111943 (HIF1A)    04148 Efferocytosis     138111943 (HIF1A)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:acoe03000]     138111943 (HIF1A) Transcription factors [BR:acoe03000]  Eukaryotic type   Basic helix-loop-helix (bHLH)    Factors with PAS domain     138111943 (HIF1A) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  bHLH_HIF1A PAS_3 PAS_11 HIF-1a_CTAD PAS HIF-1 PAS_9 PAS_4 HLH Motif Other DBs NCBI-GeneID:  138111943 NCBI-ProteinID:  XP_068874603 LinkDB All DBs Position 5:complement(61923409..61958165) Genome browser AA seq 811 aa AA seqDB search MDSPGGVTDKKRISSERRKEKSRDAARCRRSKESEVFYELAHQLPLPHTVSAHLDKASIM RLTISYLRMRKLLDAGELETEAKMEKELNCFYLKALDGFVMVLSEDGDMIYMSENVNKCM GLTQFELTGHSVFDFTHPCDHEELREMLTHRNGPVKKGKEQNTERSFFLRMKCTLTSRGR TVNIKSATWKVLHCTGHIRVYDTCGNQTHCGYKKPPMTCLVLICEPIPHPSNIEVPLDSK TFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQV TTGQYRMLAKQGGYVWVETQATVIYNTKNSQPQCIVCVNYVLSGIVQKDLIFSLGQTECM LKPVESPDIKMTKIFSKDDLDDTNSLFEKLKQEPDALTVLAPAAGDTIISLDFSSNESDE QQCDEVPLYNDVMLPSSSEKLQNINMAMSPLPASETTKPLRSNADPALNREVVSKLEPNT EPLELSFTMPQVQEQPTSPSDASTSQSSPEPSSPNDYCFDVDNDMASEFKLELVEKLFAI DTEAKNPFSTQETDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSSSSQSAATITIFQQG QAAPSSAEEMKLAAECGDDAKTIIVPSSPVRGGAESSSAPASPYGGSRSRTASPIRARKG AVDQVEKPSPGAPSLLTVTLNKRSTALDEELNPKMLALHNAQRKRKMEHDGSLFQAVGIG SLFQQTGDRGGNASLAWKRVKGCKTNGHSGGEQKTIILLSTDIASKLLGQSMDESGLPQL TSYDCEVNAPIQGNRNLLQGEELLRALDQVN NT seq 2436 nt NT seq  +upstreamnt  +downstreamnt atggacagccccggcggcgtcaccgacaagaagaggattagctctgaacgcaggaaagag aagtcgagggatgcagcccggtgccggaggagcaaggagtcggaagtgttctatgagctg gctcaccagctgcccctgccccacaccgtgagcgcacacctggacaaggcgtccatcatg aggctgaccatcagctacctgcgcatgaggaagctgctggatgctggtgagctggagaca gaagccaaaatggagaaggaactgaactgtttctacttgaaagctcttgatggctttgtc atggttctgtctgaagatggggacatgatttacatgtctgaaaacgtgaacaagtgtatg ggactcactcagtttgagttgacggggcacagtgtatttgatttcactcatccgtgtgac catgaggagctgagagaaatgcttacacacagaaatggtcctgtgaaaaagggcaaagag caaaacacggagcgcagcttttttctcagaatgaagtgtacactgactagcaggggaaga acagtgaatataaagtctgctacgtggaaggtgctgcactgcactggccacatccgtgtg tacgacacgtgtgggaaccagactcactgtggatacaaaaagcctcccatgacctgcctg gtgttgatctgtgaacctattcctcacccatcaaacattgaggtccccctggacagtaaa acgttcctcagtcgtcacagtcttgatatgaaattttcctattgtgatgaaagaattaca gagttgatggggtacgagccagaggagctcctgggtcgctcaatctatgagtactatcac gcactggattctgatcatctgaccaaaacacaccacgacatgttcacaaaagggcaggtg acaacaggacagtacagaatgctggcgaaacaaggtggctatgtctgggttgaaactcaa gcaactgttatatacaacactaagaattcacagccacagtgcatagtgtgtgtgaactac gtgttgagtggaattgttcagaaggacttaattttttcccttggacaaactgagtgtatg ctgaaaccagtggagtctcctgacataaaaatgaccaaaatattcagtaaagatgacctg gatgataccaacagcctatttgaaaaactgaaacaggaaccagatgctttaactgtgctg gccccagctgctggagacacaattatctctctagatttcagcagtaatgagtctgatgaa caacaatgtgatgaagttcctttgtataacgatgtaatgctcccctcatccagtgagaaa ttgcagaatataaatatggcaatgtccccactacctgcctctgaaactacaaagccactt cgtagcaatgctgatcctgcactcaatagagaagttgtatcaaagctggagccaaacaca gagccactcgaactttcttttaccatgcctcaggtgcaagagcagccaaccagcccttct gatgcaagtaccagccaaagttcacctgagcccagtagtcccaacgactactgctttgat gtggataatgatatggccagtgaattcaaactggaattagtggagaaactctttgccata gatacagaagcaaaaaatccattctctactcaggaaaccgatttagatttagagatgttg gctccttacatcccaatggatgatgacttccagctgcgctccttcgatcagctgtccccg ctggaaagcagctcctccagctctcagagtgcagccaccatcaccatattccagcagggc caggcggcaccgagcagtgctgaggagatgaagctggcggcagagtgcggggacgatgcc aagacgataattgtcccttcgtctcccgtgcgcggcggcgccgaatccagcagtgccccc gcctcgccctacggcgggagcaggagtcgaactgcctctcccatcagagcaaggaaagga gcagtggatcaggtggaaaagccttctccaggagcacccagcttgctaacagtcactcta aataaaagatctactgcactggatgaagaactaaatccaaagatgctagctttgcataat gctcagagaaaacgaaaaatggaacatgatggttcactttttcaggcagttggaattgga tctttattccagcagacaggtgaccgtggaggaaatgcatcacttgcttggaaacgtgta aagggatgcaaaacaaatggtcacagtggaggggagcaaaagacaatcattctactatca actgacatagcaagtaaacttctagggcagtcgatggatgagagtggactcccccaactc acgagttacgactgcgaagtaaacgctcccatacaaggcaacagaaacctgctacagggg gaagaactgctcagagctctggatcaagttaactga

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