Aphelocoma coerulescens (scrub jay): 138111999
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Entry
138111999 CDS
T10543
Symbol
PSMC6
Name
(RefSeq) 26S proteasome regulatory subunit 10B
KO
K03064
26S proteasome regulatory subunit T4
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
138111999 (PSMC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
acoe03051
]
138111999 (PSMC6)
Proteasome [BR:
acoe03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
138111999 (PSMC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_2
AAA_22
AAA_5
RuvB_N
PRS7_OB
nSTAND3
Prot_ATP_ID_OB_N
AAA_14
DUF815
AAA_7
AAA_11
TIP49
AAA_33
RNA_helicase
AAA_3
TPR_MLP1_2
NPHP3_N
Csa3_N
AAA_18
Mg_chelatase
bpMoxR
DUF3829_2nd
AAA_28
AAA_lid_PRS2_C
DUF5906
TsaE
AAA_24
ATPase
NACHT
AAA_25
Occludin_ELL
AAA_17
Parvo_NS1
DUF4140
IstB_IS21
Med4
Motif
Other DBs
NCBI-GeneID:
138111999
NCBI-ProteinID:
XP_068874730
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Position
5:complement(65442265..65453123)
Genome browser
AA seq
402 aa
AA seq
DB search
MALPGIPYERLLVMADPRDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDL
KALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTI
MRYLPREVDPLVYNMSHEDPGDVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPP
KGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQP
CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDP
ALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVC
TEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDYKPV
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcccttcccggcattccctatgagcggctgctcgtcatggcggaccccagagacaag
gcgctgcaggactaccgcaagaagctgctggagcacaaggagatcgacggccgcctcaag
gagttaagggaacagctgaaagagctcaccaagcagtacgagaagtcagaaaatgatctc
aaggccttgcagagcgttgggcagattgttggcgaggttcttaaacagctgacagaggag
aaattcattgtgaaggcaacaaatggaccaagatacgtggttggctgtcgccgtcagctt
gacaagagtaagctgaagccagggacaagagttgctctggacatgaccactctgactatt
atgagatacttgcccagggaagtggatccactggtttataacatgtctcatgaggaccca
ggagatgtttcctattccgagatcggagggttgtcggaacagatccgagagttacgggag
gtcattgaactgccacttacaaacccagaattattccagcgtgtgggaatcatccctcca
aaaggctgcctgctctacggcccccctggcacaggaaaaacccttttggccagagcagtt
gccagccagctggattgcaacttcctcaaggtggtgtcgagttccatagtggacaaatac
atcggcgagagcgctcggctgatccgagagatgttcaattatgccagagatcatcagccc
tgcatcattttcatggatgagatcgatgctattggtgggcgccgcttttccgaaggcaca
tcagctgatagagaaattcagaggactctgatggagttgttgaatcagatggatggattt
gacactctgcacagagttaaaatgatcatggctacaaacagacctgacaccttggatcct
gccctgctgcggcccggaaggctggatagaaaaatccatatcgatctaccaaatgagcaa
gccagattagatattttgaagattcacgcaggtcctatcactaaacatggtgaaatagat
tatgaagcaatcgtgaagctttcagatggcttcaacggagcagacttgagaaatgtctgt
actgaagcagggatgtttgcgatccgtgccgatcatgacttcgtagttcaggaagatttc
atgaaagctgtcaggaaagtggctgattccaagaagctggagtccaagcttgactacaaa
cctgtgtaa
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