Aphelocoma coerulescens (scrub jay): 138112029
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Entry
138112029 CDS
T10543
Symbol
LRR1
Name
(RefSeq) leucine-rich repeat protein 1 isoform X1
KO
K10348
LRR-repeat protein 1
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acoe04121
]
138112029 (LRR1)
Ubiquitin system [BR:
acoe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
138112029 (LRR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_6
LRR_R13L1-DRL21
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
138112029
NCBI-ProteinID:
XP_068874794
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Position
5:complement(66222290..66229852)
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AA seq
418 aa
AA seq
DB search
MRLQCEVEVLSRLLPTYGLRGRGRAARALLSLGRPPGAAGAGIYLMVCTARDRGGARYKV
QQNVERLFTRFVEEGKATVRLREPAVDLCLSKANVINLKTFLSAVRLAHQGSDTGVLPLS
PLVPAKNSDVEKPKTKMIITSRRDYPLTKSFPFSLEHLQTSYCKLARIDTRVLCLKKLRK
LDLSHNHIKQLPATLGDLVCLQELDLHDNHLEAFSGALCSSSLQKSLQFLDLSQNQIQAL
PIEFCQLRGLVQLRLDDNALLRLPCRIGQLSHLRFLSAARNKLPFLPSDFRKLCLENLDL
FGNPFEQPNPLVPNIQLKIPLTLLECAARATVNHRIPYGCHLLPSHLCKDLEVAKTCRCG
SACLSSFIQITVTMNLHHVAHTVVLVDNMGGTEAPILCYFCSLDCYSQFLDRHLQSNG
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgcagtgcgaggtggaggtgctgagccggctcctgcccacctacgggctgcgg
ggccgcggccgcgcggcgcgggcgctgctgtcgctcgggcgcccgcccggcgctgccggt
gcagggatttacctcatggtgtgcacggcgcgggaccgcggcggggctcggtacaaggtg
cagcagaacgtggagcggctcttcacgcgcttcgtggaggaggggaaggccacggtgcgg
ctgcgggagcccgcggtggatctgtgcctcagcaaggcaaatgtgatcaatttaaagact
ttcctttcagccgtgagactggctcaccaaggcagtgacaccggagttctccctctctca
cctctggtcccagcaaagaactccgacgtggagaaacccaagaccaaaatgatcatcact
tccaggagggactatcccctcaccaagagcttccccttctccctggagcacctgcagacc
tcgtactgcaaactggccaggatcgacacgagggtgctgtgcctgaagaagctccgcaag
ctggacctgagccacaaccacatcaagcagctgccggccacgctgggggacctggtgtgt
ctgcaggagctcgacctgcacgacaaccacctggaggccttcagcggggccctgtgcagc
tccagcctgcagaaatccctgcagttcctggacctgagccagaaccagatccaggcgctg
cccattgagttctgccagctgcggggcctggtgcagctgaggctcgacgacaacgccctg
ctgcgcctgccctgcaggatcgggcagctgagccacctgcgcttcctgtcggcagcacgc
aacaagctgcccttcctgcccagtgacttcaggaagctctgtctggagaacctggatctc
tttgggaatccttttgagcagcccaatccgctggttcccaacatccagctgaaaatccca
ttgactctgttggagtgtgctgccagggccaccgtcaatcacagaatcccttacggctgt
cacctcctcccttcccacctttgcaaggatctggaagtggccaaaacgtgccggtgtggg
agcgcctgcctgagcagcttcatccagatcacggtgaccatgaacctgcaccacgtggcc
cacaccgtggtgctcgtggataacatgggaggcacggaagctcccatcctctgctacttc
tgctccctggactgctattcccagttcctggacaggcacctccagagcaacgggtga
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