Aphelocoma coerulescens (scrub jay): 138112250
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Entry
138112250 CDS
T10543
Symbol
HERC4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04120
Ubiquitin mediated proteolysis
Brite
Enzymes [BR:
acoe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
138112250 (HERC4)
Ubiquitin system [BR:
acoe04121
]
Ubiquitin ligases (E3)
HECT type E3
138112250 (HERC4)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138112250
NCBI-ProteinID:
XP_068875128
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Position
6:5101222..5130951
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AA seq
1062 aa
AA seq
DB search
MKRSVNMLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGT
VYTCGCNDLGQLGHEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDG
QLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYE
YKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPT
LLKSLRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS
VVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGNWIAYSTQCPM
STDNEECYCVKRIFSGGDQSFAHYFYPQNMVPPDDFRYPDLLKQIWTVNEMFIQRLLSFP
SGRLPVEIANEIDGTFSSAGCLNGSFLALSNDDHYKTSTRFSGVDMNAARLLFHKLIQPE
HTHISQQVAASLEKNLIPKLTSSLPDVEALRLYLTLPECPLMSDENNFTTLAIPFGAAIL
NLEKAPLKVLENWWSLLEPPLFLKIVELYKDVVVHLLKLCKMGLPPADRRILTNFLHTAF
RVLEILHRVNERGQVIQYDRFYIHEIQDLIDIRNDYANWFQQQVLGMDVNHGLTELTDIP
VIICTYPFVFDAQAKTTLLQTDAIIQMQMAVDQAHRQNLSSLFLPVFESVNPCLILMVRR
DNIVGDAVEVLRKTKNVDYKKPLKVIFVGEEAVDAGGVRKEFFLLIMRELLDPKYGMFRY
YEESRLIWFSDKTFEDSDLFHLIGVVCGLAIYNFTIVDLHFPLALYKKLLNKKPSLDDLK
ELMPDVGRGMQQLLDYPEDDVEEAFCLNFTITVENFGTTEIKELVPKGADIPVVKQNRQD
FVDAYVDYIFNRSVASLYSAFHEGFHKVCGGKVLQLFQPSELQAMVIGNTNYDWKELEKN
TEYKGEYWADHPTIKIFWEVFHELSLEKKKQFLLFLTGSDRIPILGMKCLKLVIQPTGGG
EDYLPVAHTCFNLLDLPKYTDKETLKSKLIQAIDHYEGFSLV
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaagtgtaaacatgttgtgctggggcaatgcatcttttggacagcttggattg
ggtggaattgatgaagagattgttttagaacccagaaaaagtgactttttcctaaataaa
agggtcagagatgtaggatgtggactgagacatactgtttttgtcctggatgatgggact
gtttatacgtgtggatgcaacgatctaggacaactagggcacgaaaaagccaggaaaaga
cctgagcacgttggtgcactggatgcccaaaatattgtagctgtatcatgtggagaagcc
cacactcttgcattaaatgacaaaggtcaggtatatgcttggggtctggctactgatgga
cagcttggcttgcctggaacagaggaatgcatcagagtgcccagaaatattaaaagctta
tcagagatccaaattgttcaagttgcttgtggttattatcactcgctagcactatcaaaa
ggaagtgaagtgttttcctggggacaaaacaaatatggccagctgggcttaggttatgag
tataagaaacaaacctctccacaaatgattaaatctctgctgggaatcccttttgcacag
attgctgcaggaggagctcatagttttgtactaactctttctggagccatctttggatgg
ggacgcaacaaatttgggcagctgggtcttaatgatgataatgacaggtatgttcctacg
ctgctgaagtccctgagaagtcagaaggttgttcatatatgttgtggagaagatcatact
gctgcccttacgaaggaaggtggggtttttacatttggagctggaggctatggtcagttg
ggtcataactctaccagccatgagataaatccaaggaaagtttttgagcttatgggaagt
gttgtcacgcaaatcacctgtggcaggcagcacaccactgcattcgtcccttcttctgga
agaatttattcttttggactcggaggtaatgggcaattaggtactgggaccaccagtaac
aggaaaagtcccttcacagtgaaaggaaactggattgcctatagtactcaatgcccaatg
agcacagacaatgaggagtgctattgtgtaaagagaattttctctggtggggaccaaagt
tttgcacactacttttatccacagaacatggtgccaccagatgattttaggtatcctgac
cttttgaagcagatctggactgtgaatgaaatgtttattcaaagattgctgagtttccca
tctggaagacttcctgtagagatagctaatgaaattgatggaacgttctcctcagctggg
tgcctgaatgggagctttttggcattgagcaatgatgatcattacaaaaccagcactaga
ttctcaggggttgatatgaatgctgctagactactctttcacaaactcatacagcctgag
catactcacatatcacaacaggtggcagctagtttggaaaagaaccttattcccaagttg
accagctccttaccagatgtcgaagctttgaggctgtatctcactcttccagagtgccca
ctgatgagtgatgaaaacaatttcacaacgttagctattccttttggagcagctattctg
aacctagaaaaagctcctctgaaagttcttgaaaattggtggtctctacttgaacctccc
ttgttcctcaagatagtggaactctacaaggatgtcgtagtgcaccttttgaagctgtgc
aagatgggccttccacctgctgacagaaggatacttaccaatttcctacacacagccttc
agagttctggaaatactgcacagagtaaatgaaagaggacaagttatacagtatgacaga
ttttacattcatgagatacaagatttgatagatatcagaaatgactatgccaactggttc
cagcagcaggtattgggaatggatgtcaaccatggattaactgagttaacagatattcct
gttataatttgcacatacccatttgtatttgatgcccaggcaaagacaactctcttgcaa
acagatgcaataatacagatgcagatggctgtcgatcaggcccacaggcagaacttgtct
tctcttttcctgccagtatttgaatctgtcaatccatgcctgatattaatggtccggagg
gacaacattgtaggggacgctgtggaggtcctaaggaaaacaaagaatgtagactacaag
aaaccactcaaggttatatttgtaggggaggaagctgttgatgctggaggtgttcgcaaa
gaattttttttgctcatcatgagggagttgctagatcccaaatatggaatgttcaggtat
tatgaggagtccaggctgatctggttctctgataagacctttgaagacagtgacttgttt
catttgattggtgttgtctgtgggctagcaatatataattttactattgtagaccttcat
tttcctctggctttgtacaaaaagctattgaataagaaaccatccctggatgacttaaaa
gaattgatgccagatgttggcaggggaatgcaacagctcctggactatccagaggatgac
gtagaagaagcattttgtcttaattttactatcactgtggaaaattttggtacaacagaa
attaaggagcttgttcctaaaggtgctgacattcctgtagtcaaacagaataggcaagat
tttgtagatgcatatgtggattacatcttcaatagatctgtggcttccttatacagtgca
ttccatgaaggcttccacaaagtatgtggaggtaaagttcttcagctcttccagcccagt
gagttgcaggcaatggtgattgggaacacaaattatgactggaaagagctggagaagaat
acagaatacaaaggagaatactgggcagaccatcctacaattaaaatattctgggaggtt
tttcatgagttgtctttggagaagaaaaaacagtttttgttgtttctgacaggcagtgat
cggattccaattcttggaatgaagtgtctcaaactggtcatccagccaacaggaggagga
gaagattatctgccggtagctcacacttgctttaatcttcttgatcttccaaaatacaca
gataaagaaaccctaaaatctaagttgatccaggctatagaccactatgaaggtttcagt
ttagtataa
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