Aphelocoma coerulescens (scrub jay): 138112346
Help
Entry
138112346 CDS
T10543
Symbol
BMS1
Name
(RefSeq) ribosome biogenesis protein BMS1 homolog
KO
K14569
ribosome biogenesis protein BMS1
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
138112346 (BMS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acoe03009
]
138112346 (BMS1)
Ribosome biogenesis [BR:
acoe03009
]
Eukaryotic type
90S particles
GTPase
138112346 (BMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
GTP_EFTU
Tsr1_G-like
MMR_HSR1
AAA
AAA_16
RNA_helicase
AAA_22
Motif
Other DBs
NCBI-GeneID:
138112346
NCBI-ProteinID:
XP_068875355
LinkDB
All DBs
Position
6:complement(12222206..12245238)
Genome browser
AA seq
1312 aa
AA seq
DB search
MEEKEKKKHRAKHSGPKAEKKRKRYLNDLGIGDEENARKRNPKAFTVQSAVRMARTFHRT
QDLKTKKHHIPVVDRTPLEPPPVVVVVVGPPKVGKSTVIKCLIKNFTRQKLVEIRGPVTI
VSGKKRRLTIIECGCDINTMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPKIM
GVLTHLDTFKNNKQLKKTKKKLKHRFWTEVYPGAKLFYLSGMVHGEYQKQEIHNLGRFIS
VMKFRPLTWQTSHPYVLADRMEELTNPEDVRINPKCDRKISLYGYLRGAHLKNKSQIHMP
GVGDFTVSDVSFLPDPCALPEQQKKRSLNEKEKLVYAPLSGVGGIVYDKDAVYIDLGGSH
AHEKEEEEVRPNHELVQSLISTHSAIDVKMASSKVSLFMDSTPLGSEDVGQEFVMPKEER
QVDLKTGRVRRKAIFEDEEKENDDVASDEEDDQEEEEEEEAVSEDGSDGDDENEAEEESE
RELLREGTSVRRAKRLKTEVAEEEAVNELPAFADSDDDLEMSSEEEGETAPEDSEMEEDD
EEEEGDEKRPCEDESSESEFEAANKRAAYKQCDMNSERTETKSQISDHSPKRKAVLTTDS
GNCTAEEASESDDEDSSLEEGDDGRSHEELDTEESNRNGFWHSQGKKADSVRQTKLKAVD
TEDDDVENLLREEEEYEEKIDLSADTTGALKWKEDLTQKAAEAFLRQQRSTPNLRKLVYG
TAVEDEDEESEDADDELGGLFRVSRPDKASKQKANALDCSKFLIEKLQDWDLEEVVSSIR
DCFVTGKWEDDKDAAKLLEEDEELYGDFEDLETGVVHKGKAAAGGEESGSEEEEEDEKIS
KPEPEEEEKKKERMDKKRKLKEMFDAEYDEGDTTYFDDLKEEMHKQAQLNRAEFEDQDDE
TRVQYEGFRPGMYVRIEIENVPCEFVLNFDPHYPIILGGLGNSEGNVGYVQLRLKKHRWY
KKILKTRDPLILSLGWRRFQTIPMFYMEDHNGRHRLLKYTPQHMHCGAAFWGPITPQGTG
FLAVQSVSGTTPDFRIAATGVVLDLDKSITIVKKLKLTGFPFKIFKNTCFIKGMFNSQLE
VAKFEGAAIRSVSGIRGQIKKALRTPVGAFRATFEDKLLMSDIVFVRTWYPVSIPTFYNP
VTSLLKPAGEKDTWSGMKTTGQLRYEQGIKLKQNKDSLYKPIVREKRHFNKLHIPKALQK
ALPFKNKPKNLEKKGKTPKDQWRPAVIREPHEKKISALLSALSTVNNYKIKKAKVKHREQ
LKEYLKVKQKEDEQKFKRQKEAKKKVYRILGQREKKRQKSSLKGSSKGEKSM
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaaagagaagaagaagcatcgtgcaaagcatagcggaccaaaggcagagaag
aaaaggaaacgttatctcaatgacctgggaataggagatgaggagaatgcacggaagaga
aaccccaaagcctttacagtccagtccgctgtgcggatggccaggactttccatcgaact
caggatctgaagactaagaagcatcatattcctgtggttgaccggactcctttggagcca
cctcccgtggtggtggttgtggttggccctcccaaggttgggaagagcactgtgataaag
tgtctcattaagaacttcacaaggcaaaagctggttgaaatccggggtcctgttacaatt
gtttcaggtaaaaaacgccggctgaccattattgaatgtggatgtgacattaacacaatg
attgacctggctaaagttgctgatttggttctaatgctcattgatgccagctttggattt
gagatggagacatttgaattcctgaacatttgccaggtacatggctttcccaaaattatg
ggagttcttacgcacttggacacattcaagaacaacaaacaattaaagaagactaaaaag
aagctaaagcacagattctggaccgaagtgtatccgggtgctaagttgttttatttgtct
gggatggttcacggagaatatcaaaagcaggaaattcacaatttggggcgttttatctcg
gttatgaaattccggcctcttacttggcaaacgtctcacccctatgttcttgcagacaga
atggaagagctgacaaaccccgaggatgttcgaatcaatcccaagtgtgacaggaagata
tcactgtatggatacttgagaggagcacacctaaaaaacaaaagtcaaattcatatgcca
ggtgtaggagacttcactgtaagtgatgtgagtttcctgccagacccctgtgctctccct
gagcagcagaagaaacgttccttaaatgagaaagagaagcttgtctatgcccctctttca
ggagtcgggggcattgtgtatgataaagatgctgtttacattgaccttggtggaagccat
gctcatgaaaaagaagaggaggaagtgagacccaatcacgaacttgttcagagcctcatc
tccacacactcagccattgatgttaagatggcatcaagcaaggtctctctcttcatggac
tctacacccttgggttcagaagatgtaggacaagagtttgtgatgccaaaagaagagaga
caggtggatttgaagactggaagagttcgtcggaaggccatatttgaagatgaggagaag
gaaaatgatgatgtagcaagtgatgaggaagatgaccaagaagaagaggaagaagaagaa
gcagtgtctgaagatggaagtgatggggatgatgaaaatgaggctgaggaagaaagtgag
agagagctcttgagggaagggacgagtgttaggagagccaagcgtctgaaaacagaggtg
gctgaggaggaagctgtgaatgaactgccagcatttgcagacagcgatgatgatctggag
atgagctctgaagaagaaggagaaactgcccctgaagacagtgagatggaggaggatgac
gaggaggaagagggggatgaaaaacggccttgtgaagatgaaagctcagagagtgaattt
gaggctgcaaacaaaagagctgcatataagcagtgtgatatgaacagtgaacgtacagaa
acgaaatcacaaatctcagatcacagtcccaaaagaaaagcagtgctcactacagattca
ggaaactgcactgcagaagaggcatcagaatctgatgatgaggactcttcccttgaagag
ggtgatgatggaagatcacatgaggaattagacactgaagagtcaaataggaatgggttt
tggcacagtcaaggaaagaaggctgatagtgttagacagactaaacttaaagctgtagat
actgaggatgatgatgtggagaatctactcagagaggaagaggagtatgaagaaaaaata
gatctttctgctgacacaacaggtgcactcaagtggaaagaggatctcacacagaaggca
gctgaggcctttctgagacagcagcgatcaacccccaatcttcgtaaacttgtatatgga
acagctgtcgaggatgaggacgaggagagtgaggatgcagatgatgaacttggaggtttg
ttccgtgtcagccgtccagacaaagcatccaaacagaaggctaatgctcttgactgctcc
aagtttctgatagaaaagctgcaagattgggatttagaagaggttgtgagcagtattcga
gactgctttgttactggaaagtgggaggatgataaagatgcagcaaagctgttggaggaa
gatgaagagctgtatggagattttgaagatcttgaaaccggggttgtgcacaaaggaaag
gctgctgctggaggagaggagtctggaagtgaagaagaggaggaagatgaaaaaatatcc
aaaccagaacctgaggaggaggaaaagaaaaaggagcgcatggacaagaaaagaaaactt
aaagaaatgtttgatgcagaatatgatgaaggggacaccacatactttgatgatctcaaa
gaagaaatgcataaacaagcacagctcaatcgagcggaatttgaagatcaagatgatgag
accagagtgcagtatgagggattcaggcctgggatgtatgttcgaatagagattgagaat
gtgccgtgtgaatttgtcctgaattttgatcctcattatcctatcatcctgggtggtcta
ggcaacagcgaaggaaatgtgggctatgtacagctgcgcctgaagaagcaccggtggtac
aagaagatactgaagacccgcgatcccttaatcctctcgctggggtggaggcgcttccag
accatccccatgttctacatggaggaccacaacgggcggcaccggctgctgaagtacacc
ccacagcacatgcactgcggggcagctttctgggggcccatcactcctcaggggacagga
tttttggcagttcagtctgtcagtggcacaacgcctgacttccggattgctgcgacagga
gttgtgctggatttagacaaatccataactattgtaaagaaattaaagctaactggtttt
ccattcaaaatttttaagaacacttgttttattaagggaatgtttaactctcagttggaa
gtggctaagttcgaaggtgcagcgatccgtagtgtgagtggtatccgaggacagatcaaa
aaggccctccgaactcccgtgggtgctttcagagcaacatttgaagacaagttgctgatg
agtgatattgttttcgtgaggacttggtatcctgtttctatcccaacgttttataacccc
gtaacttccttgctgaaaccagcaggtgagaaagatacttggagtgggatgaagacaaca
ggccagctgaggtatgagcaaggcatcaaactgaaacaaaacaaggattctctctataag
cctattgtgagggagaagaggcatttcaataagctccacattcctaaagcattgcagaag
gctctgccttttaaaaacaagcctaagaatcttgagaagaaaggcaagactccaaaagac
cagtggagaccagctgttatcagggagcctcatgaaaagaagatatcagccctgctcagt
gctttgagtacagtgaataattacaagataaagaaagccaaagtaaaacatcgggaacag
cttaaagaatatctcaaagttaagcagaaggaggatgaacagaaattcaagaggcaaaag
gaggctaagaaaaaagtctatcgcatactgggacagagggagaaaaagagacagaagtca
agcttgaaaggatctagtaagggagagaagagtatgtaa
DBGET
integrated database retrieval system
