Aphelocoma coerulescens (scrub jay): 138112376
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Entry
138112376 CDS
T10543
Symbol
VCL
Name
(RefSeq) vinculin isoform X3
KO
K05700
vinculin
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04510
Focal adhesion
acoe04517
IgSF CAM signaling
acoe04518
Integrin signaling
acoe04519
Cadherin signaling
acoe04520
Adherens junction
acoe04810
Regulation of actin cytoskeleton
acoe04820
Cytoskeleton in muscle cells
acoe05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
138112376 (VCL)
04518 Integrin signaling
138112376 (VCL)
04519 Cadherin signaling
138112376 (VCL)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138112376 (VCL)
04520 Adherens junction
138112376 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
138112376 (VCL)
04810 Regulation of actin cytoskeleton
138112376 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
138112376 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
acoe04812
]
138112376 (VCL)
04147 Exosome [BR:
acoe04147
]
138112376 (VCL)
Cytoskeleton proteins [BR:
acoe04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
138112376 (VCL)
Exosome [BR:
acoe04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
138112376 (VCL)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Spectrin_SYNE1_2
Motif
Other DBs
NCBI-GeneID:
138112376
NCBI-ProteinID:
XP_068875438
LinkDB
All DBs
Position
6:complement(15740278..15800632)
Genome browser
AA seq
1136 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVSAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVRAAQMLQADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKSQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKDTEAMKRALALIDSKMNQAKGWLRDPNAPPGDAGEQAIR
QILDEAGKAGELCAGKERREILGTCKTLGQMTDQLADLRARGQGATPMAMQKAQQVSQGL
DLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEHIRGIMAEARKVAE
LCEEPKERDDILRSLGEISALTAKLSDLRRHGKGDSPEARALAKQIATSLQNLQSKTNRA
VANTRPVKAAVHLEGKIEQAQRWIDNPTVADRGVGQAAIRGLVAEGRRLANVMMGPYRQD
LLAKCDRVDQLSAQLADLAARGEGESPQARAIAAQLQDSLKDLKTRMQEAMTQEVSDVFS
DTTTPIKLLAVAATAPSDAPNRDEVFDERAANFENHAARLGATAEKAAAVGTANKTTVEG
IQATVKSARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDLDKCKVAMANMQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKRFLDSGYKILGAVAKVREAFQPQEP
DFPPPPPDLEHLHLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEAINQPMMM
AARQLHDEARKWSSKPDVTVINEAAEAGVDIDEEDDADVEFTLPYDIEDDYEPELLLMPT
NQPVNQPILAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQC
AKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTN
ISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcttccacacgcgcaccatcgagagcatcctggagccggtggcccagcagatt
tcccacctggtcatcatgcacgaggagggggaggtggatggaaaggctatcccggacctc
accgcccccgtgtcggccgtgcaggccgctgtcagcaacctagtgcgggttggaaaagag
actgtgcagacaacagaagaccagatcttgaaaagggatatgccacccgcgtttatcaaa
gtggagaacgcctgcaccaaacttgttcgggcagcccagatgctgcaggcagatccttat
tcagtgccagctcgtgactatctcattgatggatcaagaggaatcctttctggaacatca
gacttgctcctgacattcgatgaagcggaggtccgtaaaatcatccgtgtctgcaaagga
atattggaatatctcactgtggcagaagtggtagagacaatggaggatttggtgacttac
acgaagaatttagggccaggaatgacaaagatggccaaaatgattgatgagagacaacag
gaattaactcaccaggaacatagggttatgctggtaaactccatgaatacagtgaaggag
ctattgcctgtacttatttcagctatgaagatttttgtaaccacaaaaaattctaaaagc
cagggaatagaagaggccttgaaaaatcgcaatttcacagtagagaaaatgagtgctgag
ataaatgaaataattcgtgtattgcaactcacttcctgggatgaagatgcctgggcgagc
aaggacactgaagccatgaagagagctttagccttgatagattcaaagatgaatcaggca
aaaggttggctgagagatccaaatgcacctccaggggatgctggtgagcaggccataagg
cagatcctcgatgaagctggcaaagcaggagagctgtgtgcaggcaaagagcgcagagag
attctgggcacgtgcaaaaccctggggcagatgaccgatcaactggccgacctccgggct
agaggacagggtgctacacccatggctatgcagaaagcccagcaggtgtcccaggggctg
gacttgctcactgccaaagtggagaatgcagctcgcaagctggaggccatgaccaactct
aagcaggcaattgctaagaagattgatgctgctcagaattggcttgcagatcctaatggc
ggcagtgaaggagaagagcatattcggggaattatggctgaagcaaggaaagttgcagaa
ctgtgtgaggagcctaaagaaagagatgatatccttcgttccttgggggaaatctctgct
ttgacagccaagctgtcagatctgcgacgacatgggaaaggtgactctcctgaggctcgt
gctttggctaagcaaatagctacatcacttcagaatttacagtccaaaacaaacagggct
gtagcaaatactaggccagttaaagcagctgtccatttggagggcaagattgagcaagct
cagaggtggatagacaatcctacagttgctgatcggggagtaggccaggcagccatccgg
ggcctggttgccgaaggccggcgtttagccaatgtcatgatgggaccgtaccggcaggac
ctgctggccaagtgtgaccgcgtggaccagctctccgcccagctggctgacctggcggcg
cgaggggagggcgagtccccccaggccagggccatcgctgctcagctccaggactcgctg
aaggatcttaaaacacgaatgcaagaggcaatgacccaggaagtttctgatgtttttagt
gacaccacaactcctattaaattgttagcagtagcagccaccgctccctctgatgctccc
aacagagatgaggtgtttgatgaaagagcagcaaactttgaaaaccatgctgctagactg
ggagctacagcagaaaaagcggctgcagttggaactgccaataaaaccactgtggagggc
attcaggcaacagtgaaatcagcaagggaactcaccccacaggtagtatcagcagctcgt
atcctcctgagaaatcctggaaatcaggctgcttatgaacattttgagaccatgaaaaac
caatggattgataatgtagaaaaaatgacagggttggtggatgaagccattgacactaaa
tctctgttggatgcatcagaagaggctattaagaaggacctggataaatgtaaagttgca
atggccaacatgcaacctcagatgctggtagctggtgccaccagcattgccagacgagca
aaccgtatcctgctggtcgcaaaacgggaggtggaaaactcagaagaccctaaatttcgg
gaggctgttaaagcagcctctgatgagctgagcaaaactatatcacccatggtaatggat
gctaaagctgtggcaggcaacatttctgatcctggtttgcagaagcgtttcttggattct
ggatacaaaattctgggagctgtggccaaagtcagagaagccttccagcctcaggaacca
gattttcctcctcctcctcctgaccttgagcaccttcatctgacggacgagctcgctcct
ccgaaaccaccgctgccagaaggtgaggttccccctcccagaccaccaccacctgaagaa
aaggatgaagagttcccagagcaaaaagcaggagaagcaatcaatcaacccatgatgatg
gctgctagacagttgcatgatgaagcccggaaatggtctagcaagcctgatgtgactgtg
attaatgaagcggctgaggctggtgtagatatagatgaggaggatgatgcagatgttgaa
ttcactctcccctatgacattgaagatgattacgagcctgagctgctgttaatgccaacc
aatcagcccgttaaccagcccattctggctgctgctcagtctctacatcgggaagcaacc
aagtggtctagtaaggggaacgacatcatcgcggcggcgaagcgcatggcgctgctcatg
gccgagatgtcgcgcctggtcagaggcggcagcggcaacaagcgcgccctcatccagtgc
gccaaggacatcgccaaggcgtctgacgaggtcacgcggctcgccaaggaggtggccaag
cagtgcacggacaagcgcattaggacaaacctcctgcaggtctgtgagcgaatcccaacc
atcagcacacagctgaaaattctctccactgtcaaagctaccatgctgggcagaactaat
atcagtgatgaagagtcggaacaggcaactgagatgttggttcataatgcccagaatctc
atgcagtctgtgaaggaaactgtgagagaagctgaagcagcatccattaagataagaaca
gatgctggattcactcttcgctgggtcagaaagaccccatggtatcagtaa
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integrated database retrieval system
