Aphelocoma coerulescens (scrub jay): 138112382
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Entry
138112382 CDS
T10543
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
Ubiquitin system [BR:
acoe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
138112382 (ZSWIM8)
BRITE hierarchy
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138112382
NCBI-ProteinID:
XP_068875457
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Position
6:complement(16195359..16254399)
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AA seq
1822 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKMKD
GLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDIRLYSCLANGS
ADEFQRGEQLFRVRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLE
ILTDQCLNYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLA
VLDPTISPQRRRDLCSQLRQWQLKVIDNVKRGQHKKSLEKLFQGFKPAVEACYFNWEEAY
PIPGITYSSTDKKNSFCWVKAIQQRSCRLQCVESACEAGRTHGQEPGGPCLQPGDRLRPS
PQEPAVRPKELSGKRKVVSETPQRVLRRLSAEGDKAVYKTAVGKAKLPVSKGLTSKHSGK
RRMSSEDSSLEPDLAEMSLDDSSLALGAEASNTFSFTESPLSRSYRDAFEEDGGVYFSEG
PEPTVRSSSMAKKSPKDPVGEMGSGDDDLPSADENSGGVSLKPEEVGENGAAGGGDDGEE
EDDYQVYYLNPQEVAKEDDDKAEGGIEEEQDVFAGIKPLEQENRMEILFACAEALYAHGY
SSEACRLTVELARDLLANPPDLKVEQPPTKGKKNKVSTSKQTWMATNTLSKAAFLLTVLS
ERLEYHNLAFRIGMFALELQRPPASTKALEVKLAYQESEIAALLKKIPLGTNEMNTIRGR
AEELREGTLCDYRPVLPLMLASFIFDVLCTPVVSPTGSRPPSRNWNNEMPGDEELGFEAA
VAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQSKLKKILDKLLDRESQTHK
PQTLSSFYSSSKPTVANQKSPSKHAAQSAAAIQQLPGTSVTQQTAVSTAVQSSPENFVEK
SAQESSQRSPCEPAAEATVLKQEGKVPSRLALGNRGGYNGRCWGSPVRQKKKHTGMASID
SSAPETTSDSSPTLSRRPLRGGWATTSWGRGQDSDSISSSSSDSLGSSSSSGSRRASGGA
RAKTVEVGRYKGRRLESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIFTHPSSS
GGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALNILV
ECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPNEIQRALVQCKEQ
DNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYEQTVGGTPAQREGATGCSAGGAR
AASDAARGLADSRVTSEPTTVTVAAAVTAAATVMPVISVGSTMYQQHTVAGPAMAHTHTQ
GLHPYTTLQTHIPCNPQYIGHTIQHMPRPAVFPVPGSAYPQGVHPAFIGAQYPYSVTTPS
LAATAVSFPGVPVPSMTQIAVHPYPSETGLSLSSNVALGSVHAGSTFPAIQGASLTTLSS
QPNSLVTGGFPAEDEQHSQPVSPQGLHYLHSAYRVGMLALEMLGRRAHNDHPNNFSRSPP
YTEDVKWLLGLAAKLGVNYVHQFCVGAAKGVLSPFVLQEIIMEALQRLNPAHVHNHLRTP
AFHQLVQRCQQAYMQYIHHRLIHLTPADYDDFVNAIRSARSAFCLTPMGMMQFNDILQNL
KRSKQTKELWQRVSLEMTTFSP
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atggaactcatgttcgcagagtgggaggacggggagaggttttcatttgaagactccgat
cgctttgaagaagactctctttgttccttcatctctgaggcagagagcctttgccagaac
tggagaggatggaggaagcaatcggctggacccaattcccccactgtcaaaatgaaagat
gggctggtgatcccattggtggaactctctgcaaaacaggttgcatttcacattccattc
gaggtggtggagaaggtttatcctccagtgcctgagcagctgcaacttcgaatcgccttc
tggagtttcccagaaaatgaggaagatatcaggttgtactcgtgcttggcgaatggcagt
gcagatgagttccagcgaggggagcagctcttccgggtgagggctgtcaaagaccctctc
cagataggtttccatctgagtgccactgtggtgcccccccagatggtgccccccaagggc
gcgtacaacgtggcggtgatgtttgaccggtgccggatcacgtcgtgcagctgcacctgc
ggcgccggggccaagtggtgcgctcacgtcgtggcgctctgcctcttccgcatccacaat
gcatctgcagtgtgcttacgagcacctgtttctgagtctttgtctcggttacaaagagac
cagttgcaaaaatttgctcagtacctaatcagtgaacttccacaacagattcttccaaca
gctcagcgtttgctggacgaattattatcttctcagtctactgccatcaacacagtgtgt
ggagccccagatcccactgctggaccctctgcatcagatcaaagcacctggtacttggat
gaatctactctcagtgacaacataaagaaaacccttcataaattctgtggaccctctcct
gttgttttcagtgatgtgaattcaatgtatctgtcttccactgagccaccagctgctgct
gagtgggcttgtctgctgcgtccgctgcgaggaagagaacctgaaggaatctggaacttg
ctttccattgtgcgggagatgtttaagaggcgggatagcaatgcagctcctttgctggag
attctgactgaccagtgtctcaactatgagcagataactggctggtggtacagtgtgcga
acatctgcatcacacagcagtgctagtgggcacacaggacgcagcaatggccagtcagaa
gtagctgctcatgcttgtgcaagcatgtgtgatgagatggtggttctttggaggctggct
gtccttgacccaactattagtccacagaggcgcagggatctttgctcacagctcagacag
tggcagctgaaagtcatagataatgttaagaggggtcagcacaagaaatcgctggagaag
ctcttccaaggtttcaagccagctgtagaagcctgttacttcaactgggaggaagcttat
cccattcctgggattacatatagcagcactgacaagaagaactcgttctgttgggtgaag
gccatccagcagaggagctgccggttacagtgtgtagaaagtgcctgtgaggctggtaga
acccacggccaggagcccgggggaccgtgtctgcagcccggggacaggctgcggccctct
ccccaggagccagcagtgcgtccgaaagaacttagtggaaagcggaaagttgtctctgaa
acgccacagagggttctgagacggctctcagcagaaggggataaagctgtgtataagact
gcagtgggcaaagcaaagttgccagtgagcaaaggcttgaccagtaaacatagtgggaaa
cgccgcatgagcagtgaggacagctctctggagccagatttggcagagatgagcctggat
gacagcagcttggcattgggggcagaagccagcaacacctttagttttacagaaagtcca
ctgagcaggagctacagggatgcatttgaggaggatggtggagtgtacttctctgaggga
cctgagcccactgtcaggagcagttccatggccaagaaatcccccaaggatcctgtgggg
gagatgggtagtggcgatgatgacctgccttctgcggatgagaactctggtggtgtgagt
ctgaagccagaagaagtgggagagaatggtgcagcagggggaggggatgatggagaagag
gaagatgattaccaggtgtactatctgaatccacaagaggtagcaaaggaagatgatgac
aaagctgaagggggaattgaagaggagcaggatgtatttgctggtataaagcctctggaa
caggagaaccggatggagatcctgtttgcctgtgcagaggccctgtatgctcatggatac
agtagtgaggcttgccgcttgactgtagagcttgccagggacctactggccaaccctcca
gatctcaaagtggagcagccaccaactaagggcaaaaagaacaaggtatcaaccagcaag
cagacatggatggcaaccaacaccttgtctaaagctgctttcttgctgactgtgttgagt
gagcggctggagtaccacaacctggccttccgaataggaatgtttgctctggagctgcag
agaccacctgcctctaccaaggctctggaggtgaagttggcttatcaggaatctgagatt
gcagccctcttgaagaagattcccttgggcaccaatgagatgaatactattcgaggaaga
gctgaagaacttcgagaagggacattgtgtgattaccgtcctgtcctgcctctgatgttg
gcaagctttatatttgatgtcctgtgcactccagtggtttctcctacaggctctagaccc
ccaagccgtaattggaataatgaaatgcctggagacgaagagcttggttttgaggcagct
gttgctgcccttggtatgaaaacaactgtcagtgaagcagaacatcctctgttgtgtgaa
ggcacacgaagggagaaaggggatctggcactagccctgatgattacttacaaggatgat
cagtctaagctgaagaagattttagacaaactcctggacagagagagtcaaactcacaaa
ccacagacactgagttccttctactcatccagcaagcctacagttgcaaatcaaaaatct
ccttccaaacatgctgcccagtctgctgcagctatccagcagcttccagggacttctgtc
actcagcaaactgctgtaagcactgcagtccagagcagtcctgagaactttgtggagaag
agtgcacaggagagctctcagaggtctccctgtgagccagctgctgaggccactgttttg
aaacaagagggaaaggtccccagtcgtctggcccttggaaaccgaggtggatacaatggg
agatgctggggttcacctgtcaggcagaagaagaaacacacaggcatggctagtattgac
agcagtgctccggaaaccacctctgacagttctccaacactcagtcggcgtcccctacgt
gggggctgggcaacaacgtcctggggcagaggacaggacagtgacagcatcagcagttct
tcaagtgattcactgggatcttcctcttccagtggcagtaggagagccagtgggggagcc
cgtgcaaagactgtggaagttggcaggtataaagggaggcggctggagagccatgctcct
catgtcccaaaccagccctcagaggcagctgctcacttctactttgaattggccaaaaca
gtccttatcaaagcaggtggaaacagcagtacctctatcttcacccacccttcctccagt
ggtgggcaccagggaccacaccgcaaccttcacctctgcgcctttgagattgggctgtac
gcactagggctgcacaacttcgtgtctcctaactggctctctcgaacttactcatcccat
gtctcttggatcacagggcaggccatggagattggtagcgcagccttgaacatcttggtg
gagtgttgggatggacatctaactcctccagaggtggcatcattggcagacagagcttca
cgggccagagactccaacatggtgcgggcagctgctgaactggcactcagctgcctgcct
catgcccatgccctgaacccaaatgagatccagagggctctggtgcagtgtaaggaacag
gacaacctgatgctggaaaaggcctgcatggccgtagaagaggcagccaaaggaggtggt
gtgtacccagaagtcctctttgaagtagctcatcagtggtactggctttacgaacagact
gttggtgggaccccagcccagagagaaggtgccaccggctgcagcgccggtggcgcacgg
gccgcgtctgacgcagcgcgtggcttggcagacagccgggtgacctcagagccgaccacg
gtgacagtggcagctgcagtaactgctgcagcaaccgtcatgccagtgatctctgtgggg
tcaaccatgtaccagcagcacacagtggcagggccagcaatggcacatacacacacacag
ggtctccacccttacaccacccttcagactcacatcccctgtaatccccagtatattgga
cacactatccagcacatgccacgcccagctgtcttcccagtccctggctcggcgtatcca
cagggtgtccatccagcattcataggggcacagtacccttactcagtaaccacaccgtca
ctggcagctacagcagtgtccttccctggcgtgcccgtcccctccatgacgcagattgcg
gtgcatccctatcccagtgagacgggactgtcgctgtcttccaatgtagcgctaggcagt
gtccatgcaggatcaacgttcccagcgattcagggtgcttccttgacaactctgtcctca
cagcccaactcccttgttacagggggttttcctgccgaggatgagcagcacagtcagcct
gtgagcccccagggtctgcactacctccactctgcataccgagttgggatgctggctctg
gagatgcttggccgaagagctcacaacgaccatcccaacaacttctcccgcagcccgccc
tacactgaggatgtaaaatggctccttgggttagctgcaaagttaggtgtaaactacgtg
catcagttttgcgttggtgcagccaagggggtgctgagcccttttgtgctccaggagatc
atcatggaagctctacagaggctcaaccctgcccatgtgcacaaccacctgcgcacccca
gcctttcaccagctggtgcagaggtgccagcaggcctatatgcagtacatccatcatcgg
ctgatccatctcactccagctgactacgatgactttgtgaatgccatccgcagcgccaga
agcgccttctgcctgactcccatgggcatgatgcagtttaatgatattctccagaaccta
aagcgcagcaagcagacaaaggagctgtggcaaagggtctctctggaaatgaccaccttc
tcaccatga
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