Aphelocoma coerulescens (scrub jay): 138112414
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Entry
138112414 CDS
T10543
Symbol
NFKB2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04010
MAPK signaling pathway
acoe04625
C-type lectin receptor signaling pathway
Brite
Transcription factors [BR:
acoe03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
138112414 (NFKB2)
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NCBI-GeneID:
138112414
NCBI-ProteinID:
XP_068875589
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Position
6:17350655..17361439
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AA seq
936 aa
AA seq
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MLGLDGFLRPASSSPAGGRPRADMDEQFQPVSACLDGIDYDDFSFGSHMMEQKEPLMETV
EGPYLVIIEQPKQRGFRFRYGCEGPSHGGLPGASSEKGRKTYPTVKICNYTGMARIEVDL
VTHSDPPRVHAHSLVGKQCNEAGNCVTVVGPKDMTAQFSNLGVLHVTKKNMMEIMKEKLK
QQKMRNRNHLLTEVELREIELEAKELKKVMDLSIVRLRFTAYLRDSSGNFTLALQPVISD
PIHDSKSPGASNLKISRMDKTAGSVRGGDEVYLLCDKVQKDDIEVRFYEDDENGWQAFGD
FSPTDVHKQYAIVFRTPPYHKPKIDRPVTVFLQLKRKRGGDVSDSKQFTYYPVVEDKEEV
ERKRKKVLPQFPQHFGGGSHMGGAGGGAGGFGSGGGGNLSFPYSPGLTYNSIYSPGPHPV
GSYQGGMQMKGPEAEGPGSDRQAPEEESTYCKELQKHAQLCQLWMLALARRNAHALLDYS
VTADPRMLLAVQRHLAASQDENGDTPLHLAIIHEQTAVIKQLIDVIVSIPSQQIINISNN
LQQTPLHLAVITKQPQVVQLLLQARADPTLLDRYGNSLLHLALQAGDEEMLRTLLAHLGS
ASPYLLRLPNFHGLLPVHLAVKAKSLACLDLLVRTGADVNAVERQSGRTPLHLAVEMENL
NMATHLVKKLGADVNSRTFSGNTPLHLAAGLGSPTLTKLLLKAGADVLCENDEPMSLSSS
EASSDTDTDPEEQELAMDLGEPAPAAEHSTNPKLLTQGHWQAGHRQRRCHTSLDLTRSQK
VREILLQASQQGPEAELPTAPQPGKVLSLDNEALKGLEQLLNQDCSGSDWIELAKRLGLC
SLVETYKDTPSPSVSLLRSYELAGGSLGGLLEALDSMGLHNAVRMLHKTEALEKLQSTEL
KEDSAYGSESVEEEQAPTLALKPGGELPPSQQPQVH
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgctggggctggacgggtttctgagaccagcctcttcctccccggccggcggccggccc
cgcgccgacatggacgagcagttccaacccgtgagtgcgtgcctggatgggattgactac
gatgacttcagttttggctcccacatgatggagcagaaggagcccctgatggagacggtg
gaaggtccctaccttgtcattattgagcagccaaagcagcggggtttccggtttcgatac
ggctgcgagggcccttcccatggggggctgccaggagcatccagtgagaaggggcgcaag
acctatcccactgtcaagatctgtaactacacagggatggcccggatcgaggtagacctg
gtgacacacagtgaccctccccgtgtgcatgcccacagcctggtgggcaagcagtgcaac
gaggctggcaactgtgtcacggttgtgggacccaaggacatgacagctcagttcagcaac
ctgggtgtgctccatgtcaccaaaaagaatatgatggagatcatgaaggaaaagctgaag
cagcagaagatgcgcaacaggaaccatctgctgacggaagtggagctgcgtgagattgag
ctggaggcgaaggagctgaagaaggtgatggacctgagcattgtgcggttgcgcttcacc
gcctacctccgtgacagcagtgggaacttcacgctggccctccagcctgtcatctcggac
cccatccatgacagcaagtcccctggagcttccaacctgaagatctcacggatggataag
acagcaggctccgtgcggggaggagacgaagtctacttgctgtgtgataaagttcagaaa
gatgacattgaggtgcgtttctacgaggatgacgagaatggctggcaggccttcggggac
ttttctcctacggatgtgcacaagcagtacgccattgtcttccgcacacccccctaccac
aagcccaagatcgaccgtcctgtcaccgtcttcctgcagctgaagcggaagcggggaggg
gacgtgagtgactccaagcagttcacctactacccagtggtggaagataaggaagaagtg
gagaggaagcgcaagaaagtcctgcctcagtttcctcagcactttggcggtggctcgcac
atggggggggccggcgggggggccgggggctttggctctggaggaggtgggaacctcagc
ttcccatactcccctgggctgacctacaacagcatctactcacccggcccccacccagtg
gggagctaccaggggggtatgcagatgaagggccccgaggcagaggggcctgggagtgac
aggcaagcccctgaagaagagagcacatactgcaaggagctgcaaaagcacgcccagctg
tgccagctgtggatgctggcactagcccgtcgcaatgcccatgccctgctcgactactcg
gtcaccgccgacccccgcatgctgctggcagtccagagacacctggccgcatcacaggat
gagaacggagacacgcctttgcacctcgctattatccatgaacagacagctgtgatcaag
cagctgatcgatgtaattgttagcatccccagccagcagatcatcaacatctccaataac
ctgcaacagacgccgctgcatctggcagtcatcaccaagcagccccaagtggtccagctc
ctgctgcaagcccgcgctgacccaaccttgttggaccgctatggcaattctctactgcac
ctggcactccaggctggcgatgaagaaatgctgaggacactgctggctcacctgggctcg
gcttccccttatctgctccgcctgcccaatttccatggcctcctgcctgtgcatttggct
gtgaaggcaaagagtttggcttgcctggacctgctggtcaggacaggagcagatgtgaat
gcagtggagaggcaaagcgggaggacccccctgcacctggctgtggagatggagaacctg
aacatggccacccacctggtgaagaagctgggagcagacgtcaacagccggactttctct
gggaacacacccctgcacttggctgctggcctaggctcccccaccctcaccaaactgctc
cttaaagctggggcagatgttttgtgtgagaatgatgagcccatgagcctatcctcatcg
gaggccagcagcgacacagacactgaccctgaggagcaggagctggccatggatctgggg
gagccagccccagctgcagagcatagcaccaaccccaagctcctcacacaggggcactgg
caggcagggcacaggcagcgccgctgccacacgtccctggacctgactcggagccaaaag
gtgcgggagattctactgcaggcctcccagcaggggcccgaggcagaactgcccactgcc
ccccagccagggaaggtcctgtcactggacaatgaggcgctgaaggggctggagcagctg
ctgaaccaggactgcagtgggtcagactggattgagctggccaagcgcctggggctctgc
agcctcgtggagacctacaaggacaccccctcgcccagtgtcagcctcctgcgcagttac
gagctggccggtggcagcctggggggactgctagaggcgctggactctatggggctccac
aacgccgtgaggatgctccacaaaactgaggcgctggagaagctgcaaagcacagagctg
aaggaagacagtgcctacggcagtgagtcggtggaggaggagcaggcgcccacactggcc
ctgaagccggggggtgagctgccccccagccagcagccacaggtgcactga
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