Aphelocoma coerulescens (scrub jay): 138112415
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Entry
138112415 CDS
T10543
Symbol
PAX2
Name
(RefSeq) paired box protein Pax-2 isoform X1
KO
K15608
paired box protein 2
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoe03000
]
138112415 (PAX2)
04131 Membrane trafficking [BR:
acoe04131
]
138112415 (PAX2)
03036 Chromosome and associated proteins [BR:
acoe03036
]
138112415 (PAX2)
Transcription factors [BR:
acoe03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
138112415 (PAX2)
Membrane trafficking [BR:
acoe04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
138112415 (PAX2)
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
138112415 (PAX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
Homeodomain
DUF6115
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
138112415
NCBI-ProteinID:
XP_068875592
LinkDB
All DBs
Position
6:complement(17531185..17636853)
Genome browser
AA seq
479 aa
AA seq
DB search
MDMHCKADPFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLA
EGICDNDTVPSVSSINRIIRTKVQQPFHPTPDGSGTGVTAPGHTIVPSTASPPVSSASND
PVGSYSINGILGIPRSNGEKRKRDEDVSEGSVPNGDSQSSVDSLRKHLRGDTFTQQQLEA
LDRVFERPSYPDVFQTSEHIKSEQGNEYSLPALTPGLDEVKSSLSTSANPDLGTNVSGPQ
TYPVVTENLSSPLSIKQEPHGASLTPFTPTTPVGSGQADLQPFHMALSDDASTPCYSAFL
HHGAHFGQSSSQPLIAGRDMASTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSGNPYS
HPQYTTYNEAWRFSNPALLMPHPGAPHLPLLPLPMTATSYHGNHMKLQGDSLGLHIVPV
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggatatgcactgcaaagcagaccccttctcagcaatgcacccagggcacgggggtgtg
aaccagctcgggggggtgtttgtgaacggcaggcccctacctgacgtggtgagacaaagg
atagtggagctggctcaccagggggtgcgaccctgtgacatttccaggcagctgcgggtc
agccacggttgtgtcagcaagatcctgggcaggtattacgagacgggaagcatcaagccc
ggcgtgatcggaggctccaaacccaaagtggccacccccaaagtagtggataaaatcgcc
gagtacaagagacaaaacccgacaatgttcgcctgggagatccgggacaggctattggcc
gagggcatctgcgacaacgacacggtccccagcgtctcctccataaacaggatcatcaga
accaaagttcagcaaccttttcacccaacaccagacgggagtgggacaggtgtgactgca
ccaggacatactattgtgcccagcacagcatcccctcctgtctccagtgcctccaatgat
ccagtgggctcttactccattaacgggatcctggggattcctcggtcgaatggcgagaag
aggaaacgtgatgaagatgtatccgagggctcagttcccaatggagattcccagagcagc
gtggacagtttgcggaagcaccttcgtggcgacactttcacccagcagcagctggaagct
ttagatcgagtttttgagcgtccttcttaccctgacgtctttcaaacatcagagcacatc
aaatctgagcagggtaatgagtactccctcccagctctgacccctggtctcgatgaagtc
aaatcaagtctatccacctctgctaacccagacctggggacaaatgtgtcaggaccccag
acgtaccctgtggtgaccgaaaacctctcctctcccctcagtataaagcaagagcctcat
ggagcctctctcacccctttcacccccaccacgccggtcggctctgggcaggctgatctt
cagcccttccacatggccctttcagacgatgcgtccacgccttgctacagtgccttcctt
catcatggtgcccactttgggcagtccagcagccagcctctgatagcaggtcgtgatatg
gcaagcaccaccttgcctggctacccaccccacgttcccccaactggacaaggcagctac
ccaacatcaactcttgcaggaatggttcctgggagcgagttttcagggaacccctacagc
caccctcagtacacgacctacaacgaggcctggcggttcagcaaccctgcattactaatg
ccacatcccggggctccgcacctcccactgctgccgctgcctatgaccgccactagttac
catggaaaccacatgaaactgcagggcgacagcttaggcctccacattgtacctgtctga
DBGET
integrated database retrieval system
