Aphelocoma coerulescens (scrub jay): 138112550
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Entry
138112550 CDS
T10543
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
acoe03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
138112550 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
138112550 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
138112550
NCBI-ProteinID:
XP_068875942
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All DBs
Position
6:22911532..22913826
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AA seq
195 aa
AA seq
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MAPPARYCVPGERLCSTEEATAGSGTYTRHGFIFSSLAGCLERRNEDSELPVVSVVRDSE
SQLLPNVGAVVTCKVCSINSRFAKVHILYVGSTPLKSTFRGTIRREDIRATEKDKVEVYK
SFRPSDIVLAKVISLGDAQSNYLLSTAENELGVVVARSEAGVQMVPISWCEMQCPRTHTK
EFRKVARVQPQFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcccgcacgctactgcgtccctggtgagcggctgtgcagcacggaggaggcc
acggctggcagtggaacctacacccgtcatggtttcatcttctcctcgctggccggctgc
ctggagaggaggaatgaggacagcgagctgcccgtggtgtcggtggtgagagacagcgag
tcccagctcctgcccaacgtgggggccgtggtgacatgcaaggtctgcagcattaactcc
cgctttgccaaggtgcacatcttgtatgttggctccacaccactgaaatccaccttccga
gggaccatacggagagaagatatccgagccacggagaaggataaggtagaagtgtacaag
agcttccgccccagtgacatcgtcctggccaaagttatctccttgggggatgcacagtct
aactacctgctgagcacagcagagaatgagctgggcgtggtggtggcacgaagtgaggca
ggggtgcagatggtgcccatcagctggtgtgagatgcagtgcccacggacacacaccaag
gagttccgtaaggtggcccgggtgcagccccagttcctgcagacgtga
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