Aphelocoma coerulescens (scrub jay): 138112612
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Entry
138112612 CDS
T10543
Symbol
CFAP43
Name
(RefSeq) LOW QUALITY PROTEIN: cilia- and flagella-associated protein 43
KO
K24223
cilia- and flagella-associated protein 43
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
acoe03037
]
138112612 (CFAP43)
Cilium and associated proteins [BR:
acoe03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
138112612 (CFAP43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC_Cfap43
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR5
CFAP43_N
WD40_CDC20-Fz
WD40_MABP1-WDR62_1st
Beta-prop_WDR3_1st
Beta-prop_ACSF4
Beta-prop_WDR36-Utp21_2nd
Beta-prop_RIG_2nd
WD40
Beta-prop_HPS5
Beta-prop_VPS8
Leuk-A4-hydro_C
Motif
Other DBs
NCBI-GeneID:
138112612
NCBI-ProteinID:
XP_068876069
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All DBs
Position
6:complement(25156863..25200109)
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AA seq
1684 aa
AA seq
DB search
MEGPGREGPAMEGPARAAEAALEVSWVQGFSGKNFGFINDQTVCYPCGNYILFLDIKTKK
TRALQCQTGQVGAFAANANSQVLAFSDRKLNPIISIYTFPELSKPTELKGDAQLDYTLLA
FSFTGPYLASYSSIPEFVLSVWNWQENILLCSESQPGLTGTSLSFNPMNWQQLCFVAESS
VTIWHVERCKDEHHLTRHPVELPDGHGTVTPHEDLFFPPSRNDDPYHGPDLPVSAIAGLE
GDEAETFVPRNCIKTSVHPTAHCWTATSEIYMGCKEGYVLAIDTEKYSVSVLQQKAPPEF
MQKIADVVSYVRREAQKKKGGKPNNLQKPVLLAMAFCNEGLYAAGSEGILIFYHIKELQY
EMKICADISQPISSLIFSPDYTSLLLITDQGTVYSYKPAHSGEAVKLLDTSSSCFLAADF
LTPGNNYCVSVTVSGEVQVWSLEDGTFLSKLNLGIEATSMACCPSSNSVAVGTQIGQICF
VDVTKAEAPRVVHKIFLSKLPVLSLHYDQRGQFLIARATEGHIFILDARPSKLFQVLGYI
VLADEVLHLSVISDLKNDLVEVMVLLNVAEIQQARLEIFHLSSAIATDNEKYVNEQGMFN
ASDLKKERYDLDCPLSSAVRLKDNIVYGYCTCAPFICKYHLSEENKLEDPSVYSLEKRIP
SNQFGSGLLCLSPNSQWLAAAAKDGVLFIYNTSTLDILAQKHCQSYQGGGIRSMVFSLDG
NFILVNGENDCALVCLKWKEIKETEVEEAALYWQSLLEILNKSTSDENSFLKSMPELKFD
PESTSKSLPEAPLKSSSAEVAEEDGNVTNTNDMTWIGQKMQKVMREDARRFANQKEEVQM
GIKKLRETIQKMMQENEQVPDIEKLEHWEFNLDLEEQERVQEEAERDVARVRKEIEMENL
SYCYLQDLIKYDCWDVMCVKGRAVKCFHMDCQVSNYPLKERSKEELETLKKVLHLKKTET
ADLKAQKKNLEVDSETALSKEEGEKAAEEVADDGASHCLNGSLSCQYGGDTSTLYHQCDL
HTREQKLHQTILLKDIIYKVKTAFNEEFDAIVQQKEQEIARVKEANMKIREILEQLELQV
EVWEPVLTDDEMPERALTVQDSEIKAEKYLTEEEKEQLELLAKLERERRLAATDDERLRA
LDDMMGGVLEIRREDVLKMDIPPPSFISRPEDLWSEEEKKRFEDYEKKVKELNEDKEEYR
EFLRNEWKKLEDSIKETTQNFDESVCKLSEKKVKSQMVIYQEELKIVNLIYALLLDEELD
TREAGLHKFLTKKKKEKVKSARKILTAKNGVEAYTGPYKDAIHEGKSLEHHFIEEFADIP
EDLLHELLQLYKHRPETPWTETLLDTANPYVKGSPEDCQDALSLLMKAMDELDSPEHMPS
GLDQSVWERFCLARRNKMESEELVKWKARALEEMQAFLQRRVDENEKMKSELENIFQELT
WLKEEKMKLQQNLMVQFLLKQGQVELGSTEVPDYSDAVLINRSVVEELNSTLAAQGEKKI
TAMVEFKDFSKGIIQLEWEHKKMKMQIQDLTEKARDIVILPISKDCQLFLTVQNYDTHIA
QHLAGMEQSLGVMDKLHKKNVKNHQKKVRELKKCIRLKEQANYELSLQLKKMLISVSERM
HIIEAADTQDISEKITKQRYQEILKQKYLRNFIREQEKQLTVLQSEAESLKPRTLHIVXK
SESR
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atggagggaccgggcagggagggccccgccatggagggccccgcccgcgctgcggaggcc
gcgctggaagtgagttgggttcagggattctcaggcaagaactttggctttatcaacgat
cagactgtctgctatccttgtggtaattacatcctcttcctggacatcaaaacaaagaag
acaagagcactgcagtgtcagactggccaggtgggagcctttgcagcaaatgccaacagt
caagtgctggccttttccgaccggaagctcaatcccatcatatccatctacacttttcct
gaactgagtaaaccgacagaattaaaaggtgatgctcagctggactacaccttacttgca
tttagtttcacaggcccatatctggccagttactcttcgatcccagaatttgttctttca
gtatggaattggcaagaaaatatcctcctgtgcagtgagtctcagccagggctaacgggg
acctctctgagttttaaccctatgaattggcagcagctgtgttttgttgctgagagctcc
gttaccatctggcacgttgagaggtgtaaggacgagcatcaccttacgcgacaccctgtg
gaactccctgatggtcatgggactgtgactcctcacgaggatttgtttttcccaccttct
cgtaatgatgatccataccatggccctgatttgccagtttcagccattgctggactggaa
ggagatgaagcagaaacatttgtgcctagaaattgtattaagacttctgtgcatcccact
gcccactgctggactgcaacctcagaaatatacatgggctgtaaagaaggatacgttttg
gccattgatactgagaagtacagtgtttctgttcttcaacaaaaagctccacctgagttc
atgcagaaaatagcggatgtggtgtcctatgttcgtagagaagcgcagaaaaagaaaggt
ggcaaaccaaacaatctgcaaaaaccagttttacttgccatggcattttgtaatgaggga
ctgtacgcagctggaagtgagggcattttaatcttttatcacatcaaagagctgcagtat
gagatgaaaatctgtgcagatatctcacagcccatttccagcctcatattttctcctgat
tacaccagtcttctgcttatcactgaccaggggacagtctatagttacaaacctgcccat
agtggagaagctgtcaaactcttggacacatccagcagttgttttctggcagctgatttt
cttactccagggaacaactactgtgtgtctgtaacagtttcaggtgaagtacaagtttgg
tccttggaagatggaactttcctcagcaagctaaaccttggtattgaggcaacttctatg
gcttgctgtccctcctccaacagtgttgctgtagggacccaaataggtcaaatctgtttc
gttgatgttaccaaagctgaagctccacgggttgttcacaaaatttttctttccaaactt
ccagtgctgtctttgcattatgatcagaggggccagttcctcattgcaagagctacagaa
ggacacatctttattctagatgctcgtccatcaaaattattccaagttctgggatatata
gtactggcagatgaagtgctccacctttctgtaatttctgacttaaagaatgacttagtt
gaagtgatggtacttcttaatgtagcagagatccaacaagcacgactggaaatttttcat
ctgtcttcagcaattgcaacagataatgagaagtatgtgaatgaacaaggaatgtttaat
gctagtgacttgaaaaaggagcgatatgatctggattgccctttgagctcagcagtcaga
ttgaaggataacattgtgtatggctactgcacctgtgcacctttcatctgtaaataccac
ctctctgaagagaataagttggaagatccatcagtatattcattagaaaagaggattcct
agcaatcagtttggatcaggtttgctctgtttatcacccaacagccagtggctggcagca
gcagccaaggatggtgttttgtttatctacaatacttctactctggatatacttgctcaa
aagcattgtcagtcatatcaaggagggggaatcagatccatggtattctccctggatggc
aatttcatcctagttaacggtgaaaatgattgtgccctggtgtgtctgaagtggaaggag
ataaaagaaactgaagtagaggaagctgctctttactggcaatctcttcttgaaatactg
aacaagtctacttcagatgaaaattcatttttaaaatctatgccagaattgaagtttgac
ccagagtccacatcaaaatcacttccagaggcaccactgaaatcttccagtgcagaggtg
gcagaagaagatggaaacgtcacaaataccaatgacatgacatggataggccagaaaatg
cagaaggttatgagagaagacgctcggagatttgctaaccagaaggaagaagtgcaaatg
ggaattaaaaagctgcgtgaaactattcagaaaatgatgcaggaaaacgagcaggtgcca
gacattgagaaacttgagcactgggagttcaacctggatttagaagaacaggaacgagtg
caagaagaggctgaacgagacgtggccagggtgaggaaggagattgagatggagaattta
tcctactgctatttgcaagatttaatcaaatatgactgctgggatgttatgtgtgtaaaa
gggcgtgcagttaagtgcttccatatggattgtcaagtgagtaattatccactgaaagaa
cgtagtaaagaagagctggaaactttgaagaaagttctccacttaaagaagactgagaca
gctgatcttaaggctcagaagaaaaatcttgaggttgactctgagactgctttatctaag
gaagaaggagagaaggcagcagaagaagtggccgacgatggtgcatctcactgcctaaac
ggaagcctgagctgtcagtatggtggcgacacctctaccctataccaccaatgtgacttg
cacaccagggagcagaaactccatcagacaatattattgaaggacatcatttacaaagtg
aaaactgcttttaatgaggaatttgatgcaattgtacaacaaaaggagcaggagatagca
cgagtgaaagaagcaaacatgaagatccgagaaatcctggaacagcttgaacttcaagtg
gaagtgtgggagccagtccttacagatgatgagatgccggagcgagcgctcaccgttcag
gattcagagattaaagctgagaaatacttgactgaagaggagaaagagcaattggaattg
ctggctaagcttgaaagggaaagacgccttgctgctacggatgatgaaagactgcgtgct
cttgatgacatgatgggtggagtgctagaaatcaggagggaagacgttttgaaaatggat
atccctccaccttcttttatatccagacctgaggatctttggagtgaagaagaaaagaaa
agatttgaagactatgagaaaaaagtcaaagaactgaatgaagacaaagaagagtataga
gagtttctaagaaatgaatggaagaaacttgaagattccatcaaggaaacaacacaaaat
tttgatgagagtgtctgcaaactctctgaaaagaaagtgaaatcacagatggtcatctac
caggaagaactcaaaatagtcaatctcatttatgctttactgttggatgaagagttggac
accagagaagctggacttcataaattccttacaaaaaagaagaaagaaaaagtcaagagt
gcaagaaaaatcctgactgcaaaaaatggtgttgaggcttacacaggcccctataaagat
gcaatacatgaagggaagagcctggaacatcattttatagaggagtttgctgatatacct
gaggatctccttcatgaacttctacaactttacaagcatcggccagagaccccatggact
gaaaccctccttgacaccgctaacccctacgtgaagggatcacctgaggattgccaagac
gcactttcccttttaatgaaagccatggatgaactggatagtcctgagcacatgcctagt
ggcttagaccagtctgtgtgggaacgtttttgtctagctagaagaaataaaatggagagt
gaggagctggtgaaatggaaggcccgagcactggaagagatgcaggcctttctccagaga
agagtggatgaaaatgagaagatgaagtcagaattagagaacattttccaagaactcact
tggctgaaggaggaaaagatgaagcttcagcagaatttgatggtccaatttttgctaaaa
caaggacaggtggaattgggaagtactgaggtcccagactacagtgatgctgttctcatt
aataggagtgttgtcgaagaactgaatagcactcttgcggctcaaggagaaaaaaaaatt
actgccatggtagaatttaaagacttctctaaagggataatacagctggaatgggaacac
aagaaaatgaaaatgcagatacaagatctgacagagaaggctcgggatattgtaatacta
cctatttcaaaagattgccagctattcctaaccgtgcagaactacgacacccacatcgct
cagcacctagccgggatggagcagagtcttggtgtcatggataagttgcacaagaagaat
gtgaagaaccatcagaaaaaagttagagagctgaagaagtgcatccgtctaaaagagcaa
gcaaactacgagctgagcctgcagctgaagaaaatgcttatctctgtgtcagaaaggatg
cacatcattgaggcagctgacacacaggatatttctgaaaagatcacaaagcagcgttac
caagagattttgaagcagaaatatctacgcaactttataagggaacaggaaaaacagctt
acagttcttcagtcagaagctgaaagtctgaaaccaagaacactccatattgtttaaaaa
tcagagtctaggtag
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integrated database retrieval system
