Aphelocoma coerulescens (scrub jay): 138112615
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Entry
138112615 CDS
T10543
Symbol
SORCS3
Name
(RefSeq) VPS10 domain-containing receptor SorCS3 isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acoe04131
]
138112615 (SORCS3)
Membrane trafficking [BR:
acoe04131
]
Endocytosis
Others
Others
138112615 (SORCS3)
Endosome - Lysosome transport
138112615 (SORCS3)
Endosome - Golgi transport
138112615 (SORCS3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
Motif
Other DBs
NCBI-GeneID:
138112615
NCBI-ProteinID:
XP_068876076
LinkDB
All DBs
Position
6:25435751..25677186
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AA seq
1029 aa
AA seq
DB search
MAGNEISANMLHLVFLVILILTKLYDFNLGSVTESSLWRSTDYGTTYEKLNDKVGLKTVL
SYLYVSPTNKKKIMLLSDPEIESSILISSDEGATYQKYRLNFYIQSLLFHPKQEEWILAY
SLDQKLYSSMDFGRKWQLMHERVTPNRFYWSVAGLDKEPDLVHMEARTADGHTHYLTCRI
QECSETKRSGPFSRSIDVSSLVVQDEYIFIQVTTGGRATYYVSYRREPFAQIKLPKYSLP
KDMHIISTDENQVFAAVQEWNQNDTYNLYISDTRGVYFTLALENVKSSRGLEGNIVIDLY
EVAGIKGIFLANRKIDDQIKTFITYNKGRDWRLLQAPDTDLRGDPVLCQLPFCSLHLRLQ
LSENPYTSGSISSKETAPGLLVATGNIGSELSYTDVGVFISSDGGNSWRQVFEEEYNVWF
LDWGGALVAMKHTSVPIWHMWVSFDEGRSWTKYSFTSTPLFVDGSLVDPGIETQIMTVFG
HFSLRSEWQLVKVDYKSLFSRRCTKDDYQTWHLHNQGEPCVMGERKIYKKRKPGAQCSLG
RDYSQTVVSEPCVCGQGDFECDYGYERHSNNQCIPAFWFSPSSLSKDCNVGQNYWNSTGY
RRIVSNNCTDGLREKYMAKMEKCPGKAPRGLHILTSDGKLVMEQGRNATFVILMEEGDLQ
RTNIQLDFGDGIAVSYANFSPVEDGVRHVYKSAGIFQVMAYAENSLGSDTAVLFLHVVCP
VEHVHLSVPFVAIRNKDVNITAVVWPSQAGTLTYFWWFGNSTKPLITLESSISYMFTVEG
MNTVTVQVAGGNTLIQDTKEIAVHEYFQSQLLSFSPNLDYHNPDIPEWRQDVGKVIKRAL
AEVTGIPDEQILVAVFPGLPTSAELFILPHKNTTERRKSSEADLEQVVEILFNALNQNLV
QFELKPGVEVVVYVTQLTLAPLVDSSSGHSSSAMLMLLSVVFVGLAVFLIYKFKRKIPWI
NIYAQVQHDKEQEMIGSVSQSENAPKITLSEFTDPEELMDKELDTRVMGSISTIANSEST
KEIPNCTSV
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaaatgagatctctgcaaacatgcttcacttggtgtttttggtgattctcatt
ctgacaaagctctacgacttcaacttggggagtgttacggagagctcactgtggaggtca
acagactatggcactacctatgaaaagctaaatgacaaagtgggcctgaagactgtgcta
agctacctatatgtcagtcccactaacaagaagaagatcatgcttcttagtgatccagag
attgagagcagcatcctcatcagctctgatgaaggggctacctaccagaagtaccgtttg
aacttctatatccagagcttgctcttccaccccaagcaggaggagtggatcttggcctac
agtctggatcaaaagctgtacagctccatggactttggaaggaaatggcagctcatgcac
gagcgggtcactccaaacaggttttactggtcagtggctggtttggataaagaacctgac
cttgtgcacatggaagcccggacagctgatggacacacccactatttgacctgtcggatc
caggagtgctccgagaccaaaaggagtgggcccttctcgcgctccattgatgtcagctcc
cttgttgtgcaggatgaatacatcttcatccaggtgacaactggtggaagagcaacttac
tatgtgtcctacagacgggagccttttgcacagattaaattacccaaatactcccttcct
aaggacatgcatattatcagcacagatgagaatcaggtctttgcagctgttcaagagtgg
aaccagaatgatacgtataacctgtacatctcagacacccgaggggtctacttcaccctg
gccttggaaaatgtgaaaagcagccggggactggaggggaatatcgtcattgacctttat
gaggtagcagggatcaaaggcatattcctggctaacaggaagatagatgaccaaatcaag
actttcattacctacaacaagggcagagactggcgtttgctacaggcaccagacaccgat
ctaagaggggatcctgtactttgccagctgccattttgctcattgcacttgcgcctgcag
ctctcagagaatccgtatacttcagggagcatttccagcaaagagacagctcctgggctg
ctggtggcaacgggcaatattggctctgagctttcctacacggatgttggcgtgttcatc
tcttctgatggtggcaattcctggagacaggtcttcgaggaggaatacaacgtttggttt
ctggactggggaggggcactagtggccatgaagcacacatcagtgcccatctggcacatg
tgggtgagttttgatgagggaagatcctggactaaatacagtttcacatcaacaccactt
tttgtggatggatcccttgtagaccctggcatagagacccagataatgacagtttttggg
cacttcagtctccgttctgagtggcagctggtcaaggtggattacaagtctctcttcagc
cgcaggtgtaccaaggatgactaccagacctggcatctgcacaatcagggggagccttgt
gtcatgggagagaggaagatctataaaaaacgcaagcctggagcccagtgttccctaggt
cgggactattcccaaactgtggtgtctgaaccgtgtgtctgtggccaaggagactttgag
tgtgactatggatatgagaggcacagcaacaaccagtgtatcccagccttctggttcagc
ccatcctccctgtccaaggattgcaacgttggtcagaactactggaacagcactgggtac
cgaaggattgtgtctaacaactgcacagatggcttgcgagagaagtacatggccaagatg
gagaaatgccctgggaaagcaccgcggggattgcacatcctcacctccgatgggaagctg
gtcatggagcagggacgcaatgccaccttcgtcatccttatggaagagggtgatctccaa
aggacaaacatccagcttgattttggagatggcattgcagtatcctatgccaatttcagc
cccgtggaggatggcgtccgacacgtgtataagagtgctggaatcttccaggtgatggcg
tatgcagagaacagcctgggctcagacactgctgtcctgttcctgcatgtggtctgtcca
gttgagcacgtccatctgagtgtcccctttgttgccatcagaaataaggatgtcaacatt
actgcagtggtttggcccagccaggcaggcacacttacctacttctggtggtttggcaac
agcaccaagcccctcatcaccttggagagcagcatctcgtacatgttcactgtggagggg
atgaacactgtcactgtgcaagtcgctgggggcaacaccctcatccaggacaccaaggag
atcgcagttcatgagtatttccaatctcagctcctgtcattttctcccaacttggactac
cataaccctgacatccctgaatggagacaagacgttggcaaagtcatcaagagagcacta
gcagaggtgactggtatccctgatgaacagatcctggtagctgtgttccctgggctgcct
acgtctgctgaactcttcatactgccccacaaaaacacaacagagaggaggaaaagcagt
gaggctgatctggagcaagtggtagaaatcctttttaatgctctcaaccagaacctggtc
cagtttgagctgaagcctggtgttgaagtggttgtgtatgttactcagctaacattagca
ccccttgtggattccagctcgggtcacagcagttcggcaatgctgatgttgttgtctgtg
gtgtttgtgggcttggctgtttttttaatctacaaattcaagaggaaaatcccttggatt
aacatctatgcccaagttcagcatgacaaggagcaggaaatgattggctctgtcagccaa
agtgaaaatgcccccaaaatcactctgagtgagttcacagaccccgaggagctgatggac
aaagagctggacacacgagtgatgggaagcatctcaacaattgccaacagtgaaagcaca
aaggaaatccccaactgcactagtgtttaa
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