Aphelocoma coerulescens (scrub jay): 138112656
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Entry
138112656 CDS
T10543
Symbol
TRUB1
Name
(RefSeq) pseudouridylate synthase TRUB1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acoe03016
]
138112656 (TRUB1)
Enzymes [BR:
acoe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
138112656 (TRUB1)
Transfer RNA biogenesis [BR:
acoe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
138112656 (TRUB1)
Prokaryotic type
138112656 (TRUB1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
138112656
NCBI-ProteinID:
XP_068876193
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All DBs
Position
6:29357331..29384548
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AA seq
287 aa
AA seq
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MAGEAGGAALGRAADKLFSLSGLFAVRKPKGPTSAAVLNLLKERLLAEAGVQTNGNKRNQ
VLKIGHGGTLDSAATGVLVVGIGKGTKMLGTMLTGSKKYTAIGMLGKATDTLDATGKVTE
EKPYDQVTKEDLENVLLKFTGDIMQVPPLYSALKKGGERLSTLMKRGEAVEAKPARPVRV
YSLSLQQFQPPLFTLGKDVECGGGFYVRSLVNDIGKELSTCATVQELTRTKQGPFTLEEH
ALHEDKWTIDEIARSLEHCTALLPGGPSRKKLKTEHPGETAVICEDK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggaggcgggcggcgccgcgctgggccgcgcggccgacaagctcttctcgctg
agcgggctcttcgctgtccgcaagcccaagggacccacctcggccgccgtgctcaacctg
ctcaaggagaggctgctggcagaagctggtgtgcaaacaaacgggaacaaaagaaatcag
gttttgaaaattggacatggaggaactttggacagtgcagccacaggagttctggtggtt
ggtattggaaaaggaacaaaaatgctgggaactatgttgacaggttccaagaaatacact
gccattggaatgctgggcaaggctactgatacattagatgctacaggaaaagtaactgaa
gaaaaaccttatgaccaggtaacaaaagaagatcttgaaaatgtgctgctgaagttcaca
ggggacatcatgcaagttcctccactctattctgctttgaagaagggtggagaaaggctt
tcaactctgatgaagagaggggaagcagtggaagcaaagccagctcggccagtaagagtg
tacagcctttctctccagcagttccagccaccactgttcacgctgggtaaagatgttgaa
tgtggtggtggcttttatgtcaggagcctggtcaatgacattggcaaagagctctctacc
tgtgccacagtgcaggagctgacccgcaccaagcaggggccgttcacgctggaggagcac
gccctgcacgaagacaaatggacaattgatgaaattgcccggtccttggagcactgcaca
gccctgctcccgggagggccatctcggaaaaaattgaagacagagcatcctggtgaaact
gctgtaatctgtgaggataagtga
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