Aphelocoma coerulescens (scrub jay): 138112752
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Entry
138112752 CDS
T10543
Symbol
MSH4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acoe03036
]
138112752 (MSH4)
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Meiosis-specific proteins
Others
138112752 (MSH4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
nSTAND3
AAA_28
ATPase_2
AAA_30
IL2RB_N1
AAA_18
Motif
Other DBs
NCBI-GeneID:
138112752
NCBI-ProteinID:
XP_068876451
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All DBs
Position
6:37090381..37115033
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AA seq
933 aa
AA seq
DB search
MAGAGGRVAASSTSSESYTGRGSSTPGVGGRAEQTFHYTLGLLQTPHSTESSAGSSSGGA
RPGGSSGEGLVAGSGAMKPAASERGESYFGDKSSCVENANTLNLTSSSSVQGLNSTRVGK
TPLSSGRSVCRSHTPLMGYSVTSSSAVSAHTVASVIVAVVEGRGLARGEVGMASIDLKNP
EMILSQFADNTTYAKVITKLKILTPLEIIMSNTACDAGNTTKLFSLITEHFKNVTFTTVQ
RKYFNETKGLEYIEQLCASEFSTIFMEVQSKYYCLAAAAALLKYVEFIQNAVYAPKSLKV
RFQGSEKTAMIDSSSAQNLELVINNRDSRNSHTLLGVLNYTKTPGGSRRLRSNILEPLVD
AETINTRLDCVQELLQDEELFFGLQAVISKFLDTEQLLSVLVQIPKQDTVKTAESKITNL
IYLKHTLELVEPLKAALRSCSTQLLKAYYNSLEDTRFGIILEKITTVINDDTRYTKGCLS
MRTQKCYAVKPNINEFLDIARRTYTEIVDDIAGMITQLAEKYSLPMKTSFSSARGFFIQM
NADCSTLPNGQLPSEFTKITKTKNTYSFTSADLIKMNERCQESLREIYHMTYLIVCKLLN
EIYEHIHCLYKLSDIVSMLDMLLSFAHACTLSDYVRPEFTDTLAIKQGWHPILEKIAMEK
PVSNNTYLTEGSNFVIITGPNMSGKSTYLKQIALCQIMAQIGSYVPAEYCSFRIAEQIFT
RIGMDDDIETNASTFMKEMKEITYIIQNANDKSLIIIDELGRGTSAEEGIGICYAACEYL
LNLKAFTLFATHFLELCHIDALYPNVENYHFEVQHVRSSAGNKEKIAYTYTLSKGYTEEK
NYGLKAAEVSSLPSSIILDAKEITNHIAKQILHSQKSTPEMMQQRAAYQLAMRLVQTARN
SRLDPDSLRVYLKGLKKKYEASCPMPAKNDEQQ
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgccggcgggcgggtggccgcctcgtccacctcgtcggagtcttacacgggc
cgcggctcttccacgccgggcgtgggcgggcgagcggagcagacgttccactataccctg
gggcttctgcagacgccgcacagcacggagagcagcgcgggctcctccagcggtggggca
cggccgggcggctccagcggggaaggtctcgtagccgggagcggcgcgatgaagccagcg
gcttccgaaagaggagaatcatattttggggacaaaagttcttgtgtagaaaatgctaac
accttgaatctcacgagttcttcttctgtgcaaggcctgaatagcacacgtgtaggaaaa
acacctctctcttccggtagatctgtttgcaggagccatacccctcttatgggatattcg
gttacatcctcatctgcagtttctgctcatactgttgcatcggttattgtagctgtagta
gaaggaagaggccttgccagaggtgaagtaggaatggccagtatagacttaaaaaatcct
gagatgatactatcacaatttgcagacaacacaacttatgccaaggttattactaaactc
aagattttaacaccgctagaaataataatgtcgaacactgcttgtgatgcagggaacaca
acaaaattgttcagtctgataacggagcatttcaagaatgtgacttttacaactgtccag
agaaaatacttcaatgaaacaaagggtttggagtacatagaacaattgtgtgcatctgaa
tttagcaccattttcatggaggtccaatcgaagtattactgtcttgcagctgctgctgct
ttgctaaaatatgttgaatttattcaaaacgccgtttatgctcctaaatcgctcaaggtg
cgtttccaggggagcgagaaaacagctatgatagattcgtcatcagcacaaaatcttgaa
ctggtaattaataacagagattctcggaatagtcacacacttcttggtgttctaaattac
actaaaactcccggtggaagtcgaagacttagatccaatatcctggaacctctagttgat
gctgaaacaattaacacaagactggactgtgttcaggaattgctccaggatgaggagctc
ttttttggtcttcaagcagttatctcaaaattcctggacacagaacaactactttcagtt
ttggtacaaattccaaagcaagatacagttaaaaccgctgaatcaaaaataactaattta
atctacctgaagcataccttagaacttgtggagcctctgaaagctgctttaagaagctgt
agcacacagctgctaaaggcttattacaattctcttgaagatacaagatttggaattata
cttgaaaagattacaactgtaattaatgatgatacaagatacacaaaaggatgtctgagt
atgaggacccagaagtgctatgctgttaaacctaacatcaatgaattccttgacatagct
cgtagaacatacacagaaattgttgatgacatagcaggtatgataacgcaacttgcagaa
aagtacagcctgccaatgaaaacaagtttcagctctgctcgtggattttttatccagatg
aatgctgattgttcaacattacctaatggccagcttccttcagaatttacaaagataaca
aaaacgaaaaacacatatagcttcacttcagcagatttaataaaaatgaatgaaagatgt
caggagtccctgagagaaatatatcacatgacctacttaatagtgtgtaaactactgaat
gagatctatgaacacattcattgcttatacaagctgtccgacattgtgtctatgctggat
atgctgctttcatttgcccacgcctgcactctttccgattatgttcgtccagaatttacc
gatactttagcaatcaagcagggatggcatcccattcttgaaaagatagctatggaaaaa
cctgtgtctaacaacacgtacctgacagagggcagcaattttgtcattattacaggacca
aatatgagcggaaaatcaacatacctaaaacagattgctctctgtcaaattatggcacaa
attggttcttatgtcccagcagagtattgttcttttcgaatcgcagagcagatttttacc
agaataggtatggatgatgatattgaaacaaatgcatccacgttcatgaaggaaatgaaa
gagataacgtacatcatccaaaatgctaatgataaatcactcatcattattgatgaactt
ggcagaggtaccagtgctgaagaaggtatcggcatttgttatgctgcctgtgaatatttg
ctgaatttaaaggcatttacactgtttgctacacacttcctggaactatgccatatagat
gctttatatcccaatgtggaaaactaccattttgaagtgcaacatgtgagaagcagtgct
ggaaataaggagaaaattgcttacacttacacactttctaaaggatacacagaggaaaag
aactacggactaaaagctgcagaagtgtcctccctaccatcatccataattttggatgca
aaggaaatcacaaatcacattgcaaaacaaattttgcacagtcagaaaagcactcctgag
atgatgcaacagagagctgcataccagttagcaatgagattggttcagactgccagaaac
tctcgactggacccagacagtttgcgtgtatatttgaaaggcctgaagaaaaagtatgaa
gccagttgtcccatgcccgcaaaaaatgatgagcaacaataa
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