Aphelocoma coerulescens (scrub jay): 138113035
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Entry
138113035 CDS
T10543
Symbol
ITGB6
Name
(RefSeq) integrin beta-6 isoform X1
KO
K06589
integrin beta 6
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04510
Focal adhesion
acoe04512
ECM-receptor interaction
acoe04810
Regulation of actin cytoskeleton
acoe04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138113035 (ITGB6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138113035 (ITGB6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
138113035 (ITGB6)
04810 Regulation of actin cytoskeleton
138113035 (ITGB6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acoe04147
]
138113035 (ITGB6)
04515 Cell adhesion molecules [BR:
acoe04515
]
138113035 (ITGB6)
Exosome [BR:
acoe04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
138113035 (ITGB6)
Cell adhesion molecules [BR:
acoe04515
]
Integrins
Integrin beta subunits
138113035 (ITGB6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
PSI_integrin
I-EGF_1
EGF_integrin
EGF_2
EGF_TEN
EGF_Teneurin
vWA_SIBA-E
DUF2970
Motif
Other DBs
NCBI-GeneID:
138113035
NCBI-ProteinID:
XP_068876935
LinkDB
All DBs
Position
7:23193223..23243172
Genome browser
AA seq
789 aa
AA seq
DB search
MGIELLCLCFLFLQRNNYVQGTCSQESTVTCEDCLLSGPHCAWCLQENYTDSSGIHGRCD
TLENLLSKGCQLNLIEFPISEVEIHRNDPLTASSQKNNSDITQISPQKLTLRLRPGHEET
IQIKVRQTEDYPIDLYYLMDLSASMDDDLNTIKELGSTLSKEMSKLTSNFRLGFGSFVEK
PVSPFIKTTAAEINNPCRSVPYECLPTFGYKHVLPLTNDAEKFNEIVKGQRISANIDTPE
GGFDAIMQAAVCKEKIGWRNDSLHLLVFVSDADSHFGMDSKLAGIVIPNDGNCHLDHNNE
YSMSTVLEYPTIGQLTDKLMQNNVLLIFAVTNEQVHIYENYAKLIPGATVGRLQKDSGNI
LQLIIAAYEELRSEVELEILGETEGLNLSFTAICNNGTFFPHQRKCSRVKVGDTVSFNVT
VSLSSCEKTRRHIKIKPVGLSDVLEMEIHPLCSCNCQAKAEMKSPKCSEGKGSLECGVCV
CSPGYVGPRCECDESSLGASSCRGPAEHRSCSGRGDCYCGQCLCHPSPYGKVYGPRCECD
DFSCVRHRGLQCAGNGDCDCGECRCHSGWTGEYCNCTTDTSTCIAEDGTLCSGRGECICG
TCACTHPGASGQTCEKCPLCGDPCSSRRSCVECHLASDDTSLGDCSEKCKSVDATVSMAK
DYLEDKSISCSLQGENECITTFLLAVDEQGRTVIHSIERKDCAQLPNIPMIVVGVTLAIL
LIGIVLLCIWKLLVSVQDRKEVAKFEAEKSKVKWQTETNPLYRGSTTTFKNVTYKNQDKH
KRAMAPDFY
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggggattgaattgctctgcctctgtttcctatttctgcaaagaaataactatgtgcaa
gggacctgttctcaggaaagcacagtgacttgtgaagattgtttgctttctggaccacac
tgcgcttggtgtttgcaagagaattacacagactcatctggaattcatgggaggtgtgat
accctggaaaatcttttgtccaaaggatgccagttgaatttgattgagtttcccatttca
gaagtagaaattcacagaaatgatcccctaactgcatcatctcagaagaacaattctgac
atcacacagatttctccccaaaaattaactttgaggctgcgaccaggacatgaagaaaca
atccagatcaaggttcgccagactgaagattatccaattgatctctactacctcatggat
ctttcagcttccatggatgatgatctgaatacaatcaaagaactgggttcaactctttcc
aaagagatgtcaaaactgacaagcaacttcagactggggtttggatcttttgtggaaaaa
ccagtttcaccatttatcaaaactacagctgcagaaataaacaacccttgcagaagtgta
ccatacgagtgcttacccaccttcggatataaacatgttttgcccctaacaaatgatgct
gaaaaattcaatgaaattgtgaaaggacagcgaatttctgctaatatagacactccagaa
ggaggattcgatgcaattatgcaggcagctgtttgcaaggaaaaaattggatggaggaat
gattctctacatttgctggtgtttgtgagtgacgctgattcccattttgggatggacagc
aaactggcagggattgttattcctaatgatgggaactgtcatttggaccacaataatgaa
tattccatgtcaactgttctggagtatcccacaattggacaattaactgacaaactcatg
caaaacaatgttctattaatttttgctgtaacaaatgagcaagttcacatatatgagaat
tatgcaaagcttattcctggagctactgttggacgactacagaaggattctggaaatatc
ctccagttgatcattgctgcatatgaggagctgaggtctgaggttgaattggagatcctg
ggagagacagaagggctcaatctctccttcacagccatctgtaacaatgggacctttttt
ccacatcagaggaaatgctctcgtgtgaaagtgggagatacagtctctttcaatgtgact
gtaagtctctcttcttgtgaaaaaaccagaaggcatatcaagataaaacctgtgggtctc
agtgacgtgctggaaatggaaattcatcctctctgcagctgtaactgtcaggcaaaggcc
gagatgaagagcccaaagtgcagcgaggggaaaggctctctggagtgcggggtgtgcgtg
tgcagccccgggtacgtggggccgcgctgcgagtgcgacgagagctccctcggtgccagc
tcctgccggggcccggccgagcaccgctcctgcagcggcagaggcgactgctactgcggg
cagtgcctgtgccacccgtccccctacggaaaggtgtacgggccccgctgcgagtgcgac
gacttctcctgtgtcaggcacagagggctgcagtgcgcaggtaatggtgactgtgactgt
ggggaatgcaggtgccacagtggatggactggtgaatactgtaattgcacaactgatacc
agcacctgtattgctgaggatgggacactgtgcagtgggagaggcgaatgcatctgtggc
acgtgtgcttgcacccatccaggggcttcgggccaaacgtgtgaaaaatgccctctctgt
ggtgacccttgcagttccagacggagctgtgtggaatgtcacttggcttccgatgacacg
tcactgggagattgcagtgaaaaatgcaaatcggttgatgcaactgtcagcatggcaaag
gattacttagaggataaatccatttcctgctctttgcagggggaaaatgaatgtataacc
acatttctactggctgtggatgaacagggaagaacagtcattcacagcatagaacggaaa
gattgtgcacagcttccaaatatcccaatgatagtggtgggtgtcacccttgctatcctt
ctcattggcattgttttactttgtatatggaaattactggtgtcagttcaagaccgaaaa
gaggtggccaagtttgaagcagaaaaatcaaaagttaaatggcaaacggaaacaaatcca
ctgtacagaggatcaacaaccacttttaaaaatgtgacttacaagaaccaagataaacat
aaaagggctatggctccagatttctattag
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