Aphelocoma coerulescens (scrub jay): 138113096
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Entry
138113096 CDS
T10543
Symbol
SMARCAL1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
138113096 (SMARCAL1)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138113096
NCBI-ProteinID:
XP_068877056
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Position
7:complement(25062022..25099727)
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AA seq
970 aa
AA seq
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MSSGLTEEQKRRIEENRRLALARRAERLAAQRAGHVGIAAPPQKEQSLGNPGNSREENNH
VRVTSQHRQNTNTPVEQKSCLQKGCNHYTANQQMAGSHREQQKSCSEDSEQASGLKQFPA
TISNSLNYSHKHYLEAGSQEHGQHTSINLGTFQQPKCYPAFKNPTGPPHPRLIDNRHPDG
SKDLQTQNKSAIKYVSPPSSTALSDSEMLVNTNRLTESAGGGFVSQAVGRMQKLTSSAGL
GSSFEAASHKKANNVTKGKCVKYGEDRFQVEIGYNAELIAVFKKVPSKAYDPAMKKWNFS
MEDYSSLLKAANQLSSVILAPLEGENAVGLASGSHSVGSGVDVKSLLKMCKNWKKPSALV
KGKCVLISRSRFEVDIGYSAEVIGVFKQMDSRNYDMNTRKWNFLLEDYPKLMEVLLSLVS
VEVEPLPEAVIRTFAAHLQRSPSQTDIPDADLSVVDSKIVTSLMPFQREGVNFAISRNGR
LLLADDMGLGKTIQAICIAAYYQQEWPLLVVTPSSVRFTWAEAFQRWLPSLSPGSTNVIV
SGKDNLTGSLINIISFDLLSRMDKLLKSTFQVVIIDESHFLKNTKTARCQAAMPLLKAAK
RVILLSGTPAMSRPAELYTQIAAVQPTFFPQFHSFALRYCDARKMPWGWDYSGSSNLTEL
KILLEESIMIRRLKSDVLSQLPAKQRKMVVVAPEGISAKTKAVLAAEAKKMAKGYESKQQ
EKEALLVFFSRTAEAKIRSVVEYILELLESGNNKFLVFAHHKIMLDAVVVELKKKHIEHI
RIDGSTSSAERQSLCQKFQFSEKQAVAVLSLTAANMGLTLSAADLVVFAELFWNPGILIQ
AEDRAHRIGQTSSVNVHYLVAKGTADDYLWPMIQEKIKVLGEAGLSETNFSETAESTNYY
AKPDPKQKTIYDLFQKTFSESRDDTDDVLFLEAADAGCEFDSGSALQDREAETCSVSPKK
KRRIEEFFKE
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaggccttacagaggagcaaaagagaaggattgaagagaatcgccggctagct
ttggctaggagagcagagaggctggcagcccagagagctgggcacgtgggcatcgctgca
cctccgcagaaagaacagagcctgggcaatccgggaaactcgagggaagaaaataatcat
gtcagggtcaccagccagcaccgacagaatacaaacactcctgtggagcagaagagctgt
ctccagaaaggctgtaaccattacacagcaaaccaacagatggctggctcacacagagag
cagcaaaagagttgttcagaggactcagaacaagcaagtggccttaagcagttccctgca
acgatctcaaattctctgaattattcccataaacattacttggaagctggtagtcaggaa
catggacaacacacttcaattaatcttggaacattccagcagcccaaatgctacccagct
ttcaaaaaccccacaggaccacctcatccaagattaattgataacaggcaccctgatggt
agtaaagatttacaaactcagaacaaatctgccattaaatatgtttcaccaccaagcagc
actgccctgagtgattcagaaatgctggtaaacacaaacagactgacagaaagtgcaggg
ggaggttttgtctctcaggccgtgggtaggatgcagaagctgaccagctctgctggtttg
ggctcttcctttgaagctgcctctcacaagaaagcaaataatgttacaaaaggaaaatgt
gtgaaatacggggaagaccgattccaggtcgaaatagggtataatgctgaacttattgct
gtgtttaagaaggtaccaagcaaagcctatgatcctgctatgaaaaaatggaatttcagc
atggaagattacagcagtctcttgaaagcagcaaatcaactttcatcagtaattctggca
ccactggaaggagaaaatgcagttggcttggcatcaggctctcattctgttggcagtggg
gttgatgtgaaatccctcttgaagatgtgtaagaactggaagaaaccctcagcccttgtc
aaagggaagtgtgttcttatctctcgctcgcgatttgaggtcgatattgggtattctgca
gaagtgattggagtgttcaaacagatggattccagaaattatgatatgaataccagaaag
tggaatttcctgctggaggattaccccaaactaatggaagtgttactgagcctcgtgtcc
gtagaagtggagccactgcccgaagcagtaattaggacctttgcagctcatctacagagg
tctccatcacaaacagacattcctgatgctgacctttcagtagtggactccaaaattgtg
acgagcctcatgccctttcagcgggaaggtgtgaattttgcaatttccagaaacggacgt
ttgctccttgcagatgacatgggcctgggcaagaccatccaggccatctgcattgctgcc
tattaccagcaggaatggcccttgctggtggtcactccttcttctgtgaggtttacatgg
gcagaggcatttcagagatggcttccatccttgagtccaggaagcaccaatgtcatagtg
agtggcaaagacaacctaacaggaagcttgatcaacatcatcagttttgatctcctcagc
aggatggacaagctacttaagagcacattccaagtagttatcattgatgaatctcatttc
ctgaagaacacaaaaactgcacgctgccaagctgccatgcctctactcaaggctgccaag
agagtgatcctgctttcgggaacgccggccatgtcccggcctgcagagctctacacgcag
atcgccgctgtccagccaacgttcttcccacagttccactccttcgcactgcgctactgt
gatgccaggaagatgccatggggttgggactactctggatcatccaacttaactgaactg
aagattttgctggaggagtccatcatgatccgacgtctgaaatcagatgtgctttcccag
cttccagcaaagcaacgcaaaatggttgtggtagctcctgaaggcattagtgcaaagacc
aaagctgtcttggcagctgaagcaaagaagatggccaaaggatatgaaagtaaacaacag
gagaaggaagctcttcttgtctttttcagcagaacagcagaagctaaaatccgctcagtc
gtagaatacatcctggagttactggaaagtgggaataataaatttctggtgtttgctcat
cacaagataatgctggatgcagtagttgtagagctgaagaagaaacacattgagcacatt
cgcattgatggctccacatcttcagctgagcggcagtctctgtgccagaagttccagttc
tcagagaagcaggctgtggctgtcctttccctcactgctgcaaacatgggcctgacattg
tctgctgcagatctggtggtgtttgcagagctcttctggaacccagggattttgatccaa
gcagaagatcgggcacatcgaattggacagaccagctccgttaacgttcactacctggtg
gctaaaggcacagcagatgactacttatggccaatgattcaggagaaaatcaaagtgctg
ggcgaagctggtctttcagaaaccaatttctccgaaacagctgagtcaactaattactat
gctaagccagatccaaagcagaagacgatctatgaccttttccagaagaccttctctgag
agcagagatgacactgatgatgttttgtttttggaggcagctgatgctggctgtgagttt
gactctggcagtgctttgcaagacagagaagcagagacatgttcagtgagtcccaaaaaa
aagcggcgtattgaggagtttttcaaagagtaa
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