Aphelocoma coerulescens (scrub jay): 138113148
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Entry
138113148 CDS
T10543
Symbol
U2AF1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X4
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138113148 (U2AF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acoe03041
]
138113148 (U2AF1)
Spliceosome [BR:
acoe03041
]
Complex A
U2 snRNP components
U2 related factors
138113148 (U2AF1)
Complex B
138113148 (U2AF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
RRM_MUD2_C
zf_CCCH_4
Benyvirus_14KDa
Motif
Other DBs
NCBI-GeneID:
138113148
NCBI-ProteinID:
XP_068877619
LinkDB
All DBs
Position
1:complement(5258429..5275025)
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AA seq
273 aa
AA seq
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MLFCKLFSVPVSNYFIYFFLAESTAHFISKLELVAMETDVLGCTTNQHLARKRCCCKLAC
SRDQPVLTFRQLDFKKNGTNTILIQNIYRNPQNSAQTADGSHCAVSDVEMQEHYDEFFEE
VFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAEL
SPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRRKKHRSRSRSRERRS
RSRDRGRGGGGGGGGGRERDRRRSRDRERSGRF
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcttttttgcaaattgttttctgtgccagtgtctaactattttatttatttttttctt
gcagagtcaactgctcattttatttcaaaattggagcttgtcgccatggagacagatgtt
ctcggttgcacaacaaaccaacatttagccaggaagcgatgctgttgtaagcttgcctgt
agtagagaccaaccagtgctaactttcagacaacttgattttaagaagaacggtacaaat
accatcttgattcaaaacatctatcgtaacccccaaaacagtgcacagacggctgacggc
tcacactgtgctgtgagcgatgttgagatgcaggaacattacgatgagttctttgaggag
gtcttcacagaaatggaggagaaatacggcgaagttgaggagatgaacgtttgtgataac
cttggagatcatctagttggaaatgtatacgtaaagtttcgccgtgaagaagatgcagaa
aaggctgtgatcgacctgaacaatcgctggtttaatgggcagcccatccatgccgagctc
tcacctgtgactgacttcagagaggcctgctgccgtcaatatgaaatgggagagtgtaca
cgaggaggtttctgcaactttatgcatttgaagcccatttctcgagagttaaggcgtgag
ttgtatgggcggcgtcgtaaaaagcatagatccaggtcgaggtcccgtgagcgccggtct
agatccagagatcgcggtcgtggaggtggaggaggaggaggaggaggccgtgagcgtgac
aggaggcggtcaagagatcgtgaacgatccggtcgattctga
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