KEGG   Aphelocoma coerulescens (scrub jay): 138113198
Entry
138113198         CDS       T10543                                 
Symbol
CCNT2
Name
(RefSeq) cyclin-T2 isoform X1
  KO
K15188  cyclin T
Organism
acoe  Aphelocoma coerulescens (scrub jay)
Pathway
acoe03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:acoe00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    138113198 (CCNT2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acoe03021]
    138113198 (CCNT2)
Transcription machinery [BR:acoe03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     138113198 (CCNT2)
    Brd4/P-TEFb complex
     138113198 (CCNT2)
    7SK RNP complex
     138113198 (CCNT2)
SSDB
Motif
Pfam: CycT2-like_C Cyclin_N
Other DBs
NCBI-GeneID: 138113198
NCBI-ProteinID: XP_068877318
LinkDB
Position
7:33501426..33527603
AA seq 741 aa
MAAAGAGSAGSAARGGGGSSAASRWFFSREQLENTPSRRCGVEADKELSYRQQAANLIQD
MGQRLNVSQLTINTAIVYMHRFYMHHSFTKFNRNIMSPTALFLAAKVEEQPRKLEHVIKV
ANACLHPQEPQLDTKSDAYLQQAQELVILETIMLQTLGFEITIEHPHTDVVKCTQLVRAS
KDLAQTSYFMATNSLHLTTFCLQYKPTVIACVCIHLACKWSNWEIPVSTDGKHWWEYVDP
SVTLELLDELTHEFLQILEKTPSRLKRIRNWRANQAAKKPKGDGQVSENSLLGSSLVQNS
ILVDTVTGVAANTSFQKPSTSFPAPVPLTSGSISVPDSHAPENLAILATGMPSTSYSLAS
HQEWPQHQEQTRTEQIYSQKQEALPASQYNMNFQPGTSVQLHSGVHHRPDKLAEHSTVKQ
EYSHKSANKHHGQVAAPVIIPQKMSLDKYREKRKLETLELDVREHYVATPGEQQHKKHLQ
PQAASSSVTSPIKMKIPIANAEKPEKHLSDKKEKGGSLKLRIPIPPTEKGASKEELKMKI
KVSSSERHSSSDEGSGKSKHSSPHISKEHKDKHKEHLLNRHHSVGHKHSHSHGGGGSGSS
KHSTDGVMPSVLRSPVGLSSDGNSSSSGSSRKKLHSNDASHNHHSKMSKSSKSSGSSSSS
CSVKQYVSSHNSVFNLPLPPPPPVTYQVGYGHLSTLVKLDKKPVENGPDAHPQYSTNSQH
MDYKDTFDMLDSLLSAQGMNM
NT seq 2226 nt   +upstreamnt  +downstreamnt
atggcggcggcgggcgcgggctccgcggggtccgcggcgcggggcggcggcggctcctcg
gccgcgtcgcgctggttcttcagccgcgagcagctggagaacacgccctctcggcgctgc
ggcgtggaggccgacaaggagctctcgtatcggcagcaggcggccaacctcatccaagac
atgggccagcgcctcaacgtatctcagcttacgataaatactgcaattgtttacatgcac
aggttttatatgcatcattccttcacaaaatttaatcgaaatataatgtctcccacggca
ttgtttttggctgcaaaagtggaagaacagccacggaaacttgaacatgttattaaagta
gcaaatgcctgtcttcatcctcaagagccacaactggatacaaagagtgatgcatacctt
caacaagcccaagagctggttatacttgaaacaataatgcttcagactttaggttttgag
attaccattgaacatccacacacagatgttgtgaaatgtacacaattagtgagagcaagc
aaggatttggcacagacatcctatttcatggctaccaacagccttcaccttaccacattc
tgtcttcagtacaagcctacagtgatagcatgtgtgtgcattcacttggcctgcaagtgg
tccaactgggagattccagtatccactgatggaaaacactggtgggagtatgtagatccc
tcagttactctagaactactagatgagctaactcacgagtttctgcaaatactggagaaa
acacctagcaggctcaagagaattagaaattggagggctaatcaggcagctaagaaacct
aaaggtgatggacaggtatctgagaactcacttcttggttcatctttggtccagaattcc
attctggtggatacagttactggtgtagctgcaaacacaagtttccaaaaaccatctacg
tcatttcctgcaccagtacctctgacctcaggaagtatttctgttccagacagtcatgca
cctgaaaatttggcaatattagctacaggaatgccaagtacctcatacagtttggcatca
caccaggaatggcctcagcaccaagaacaaacaaggacagaacaaatatactctcagaag
caggaggcgctgcctgctagtcagtacaacatgaacttccaaccagggacatctgtacag
ttgcactccggagtacaccacagacctgacaaacttgctgagcattctactgtcaaacaa
gaatattctcataagtcagcaaacaaacaccatggacaagttgctgctcctgtaataatt
cctcaaaaaatgtctttggataaatacagagagaagcgcaaactagaaaccctggaactg
gatgtcagagaacactatgtagctaccccaggcgagcagcagcataaaaagcacctgcag
ccacaggcagccagcagttctgttacgtctcccattaaaatgaaaattcctattgcaaat
gcagagaagcctgaaaaacacttgtctgataagaaagagaagggtggctctctcaaactc
cgtattccaatcccacccacagaaaagggtgccagtaaggaggagctgaaaatgaaaatc
aaggtttcttcctcagaaaggcacagctcgtcggacgagggcagcggcaagagcaagcac
tcgagtccccatattagcaaagagcataaggacaaacacaaagagcacttgctgaaccgc
caccacagcgtgggccacaagcactcccactcccacgggggcggtggcagtggcagcagt
aagcacagcactgatggagtgatgccctccgtgctgaggagtcccgttggcctgagtagc
gatggcaattcctctagttccggctcttcgaggaagaagttgcacagcaacgatgcttct
cacaaccaccactccaaaatgagcaaaagttccaaaagttcaggtagttcatctagttct
tgctctgttaagcagtatgtatcctctcacaactctgtttttaaccttcccttaccccct
cctccccctgtcacataccaggtgggctacggacatctcagcaccctcgtgaaactggac
aagaaaccagtggagaacggtcctgatgcccatccccagtacagtacaaacagccagcat
atggactacaaagatacattcgacatgctggattcgctgttaagtgcccaaggaatgaac
atgtag

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