Aphelocoma coerulescens (scrub jay): 138113493
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Entry
138113493 CDS
T10543
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03440
Homologous recombination
Brite
Messenger RNA biogenesis [BR:
acoe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
138113493 (BARD1)
Ubiquitin system [BR:
acoe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
138113493 (BARD1)
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
138113493 (BARD1)
DNA repair and recombination proteins [BR:
acoe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
138113493 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138113493
NCBI-ProteinID:
XP_068877863
LinkDB
All DBs
Position
7:2913601..2954747
Genome browser
AA seq
790 aa
AA seq
DB search
MREALRGRSGNQPAPGSPLRSAAPSMAPPGHPWPHTRAALGRLERALSCSRCAGVLREPV
SLGQCEHVFCLSCVGDCVGTECPVCHMPAWVQDAQINRQLDNMIQLCSKLRQLLGADASD
SAEDTSTPTDSDLGKKSKKEQIKMWFSPRSRKIRCVVKRSQAETKSNDLGQDTSSVYDFF
PSPPHEKPSKPTKRPTQRQRKKMKKKHLADINKEWSLEKPEQKGVEEKTPKEKCVTICSQ
PVVLCTPEPESPEERPQQESVKEADSSNNTGGMEVLPQAESPEKKDNGEVVCSARDSKEK
YCAAETTPSIEKAVMPLKRGRQQSRHQGTPQSKRARSERDVPGKSGRQADGLEESLQGSP
ISPVTEHQPPVQISSSASNLTDTGMKTRRSAALQVINSPSLSESPSTPSTSKTCSQVATP
LSPSVLKSPGGNTIARRNYKGETLLHVASIKGDLAAVEELLKNGADPNVKDNAGWTPLHE
ACNHGHREVVELLLQHRALVNTTGYQNDSPLHDAARNGHVAIVELLLLHGASQDAVNIFG
LRPVDYAESEKMKSVLMSPVKNESFSLNQPSEALSSSQPRNGPLGVLGSNLSAEQQKLLN
KLATVLKAQRCTEFNSRVTHLVIPEVPMPSTVKCMMAVLTGCWVLKFEWVQACLQSSVRE
QEEKYEVQGGPQRGRLNREQLLPKLFDGCYFYFLGSFKHHQKSDLLELVKAAGGQVLVRQ
PKPDSDVTQTINTVAYHAEPTSDQRLCTQYVIYDVASKFQPEKIRQGKVWMAPSSWLIDC
VMSFQLLPVK
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgagggaggcgctgcgcggacgctcgggcaaccagccggccccgggcagccccctacgc
tcggccgccccctccatggcgccgcccgggcacccctggccccacacccgcgccgcgctg
gggcggctggagagggcgctgagctgctcccgctgcgccggcgtcctgcgggagcccgtg
tccctggggcagtgcgagcacgtcttctgcctatcctgtgtgggtgactgtgttggcact
gagtgccccgtgtgccacatgccagcctgggtgcaggacgcacagatcaaccggcagctg
gataacatgatccagctctgcagcaagctgcggcagctcctgggcgccgacgcctcagat
tcagcagaagatacatccacaccgactgactcagacttgggaaaaaagagcaagaaggaa
cagataaaaatgtggttcagcccaagaagcaggaagattcgatgtgttgtgaagaggagt
caggctgagactaaaagcaatgaccttggtcaagacacatcttcagtttatgatttcttt
ccttcccctcctcacgagaagccctccaagccgacaaagagaccaacccagagacagagg
aagaagatgaaaaagaaacatctagcagacattaacaaagagtggagcttagagaaacct
gagcagaaaggagtcgaggagaagactcccaaggaaaagtgtgtgaccatctgcagtcag
ccagtagtgctgtgcactccagaaccagagagtcctgaagaaagacctcagcaggagtct
gtaaaggaagctgactccagcaacaatacaggaggtatggaagttctaccacaggcagaa
tccccagagaagaaagataatggtgaggttgtgtgctctgcacgagatagcaaggaaaaa
tattgtgctgcagagacaacaccctcaatagaaaaagcagttatgcctttgaaacgtgga
aggcagcaatccagacatcagggtactcctcagtctaaaagagcaagaagtgagagggac
gttcctgggaagtcaggcaggcaggccgatggcttggaggagtcactgcagggctccccc
atctccccagtgactgaacaccagccaccagttcagatttcttcctctgcatccaatctc
actgacactggaatgaagacaagaagatctgcagcccttcaagtgataaacagtccttca
ctttcagaatctccctctaccccatccacttccaagacttgcagccaagtagcaacacca
ctcagtccttctgtgttgaaatcccctggtggcaacacaattgccagaaggaattacaag
ggagagactttgctccatgttgcttccatcaagggtgacttagcagctgtggaggagctg
ctgaaaaacggggcagatcccaatgtcaaagataatgctggctggacaccactgcacgag
gcgtgtaaccacgggcaccgggaggtggtggagctgctgctgcagcaccgggcgctggtg
aacaccacgggctaccagaacgactccccgctccacgacgctgccaggaacgggcacgtg
gccatcgtggagctgctgctcctgcacggcgcctcccaggatgcagttaatatatttggt
ctgcggcctgtggactatgcagaaagtgaaaagatgaaatctgtgctaatgtcaccagtg
aagaatgaatcattttcacttaaccagccctctgaggcactgagctccagccagccaaga
aatggacctcttggtgtactggggagcaatcttagtgcagagcagcagaaattgctgaac
aaattagcaacagtcctgaaggcccagaggtgcactgaatttaacagcagagtaactcat
cttgttatccccgaagttccgatgccaagtactgtcaaatgcatgatggctgttctgact
ggatgttgggtcctcaagtttgagtgggtacaagcctgtctgcagagctctgttcgagaa
caagaagagaagtacgaagtccaaggtggcccccagcgagggcggctcaaccgggagcag
ctgctgcctaagttgtttgatggatgctacttctattttttgggatctttcaaacatcac
cagaagagtgatctgctggagctggtgaaagcagcaggaggccaggtcctggttaggcag
cccaaaccagacagtgatgtgacacagaccatcaacacagtggcctaccatgcagagccc
acctctgaccagaggctctgcacccaatatgtcatctatgacgtggcttccaagttccag
ccggagaagatccggcagggcaaggtgtggatggccccctccagctggctcatagactgt
gtgatgtcatttcagctcctgcctgtgaagtga
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