Aphelocoma coerulescens (scrub jay): 138113716
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Entry
138113716 CDS
T10543
Symbol
NOTCH2
Name
(RefSeq) neurogenic locus notch homolog protein 2 isoform X1
KO
K20994
Notch 2
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
138113716 (NOTCH2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
EGF_2
Ank
NOD
Notch
NODP
Ank_5
Ank_3
Ank_4
EGF_3
EGF_Teneurin
DUF4064
Motif
Other DBs
NCBI-GeneID:
138113716
NCBI-ProteinID:
XP_068878432
LinkDB
All DBs
Position
8:complement(8377315..8460713)
Genome browser
AA seq
2431 aa
AA seq
DB search
MARGAGPALAALLALVLAVLRRAEPAAALQCMDDSKPCVNEGKCIPYQNGTGYCKCREGF
LGDYCQYRNPCESNTCKNGGTCEAASLIGKPTCKCAPGFTGEECQYSESHLCYVSQPCLN
GGTCHPHSQDTYECVCLPGFTGKECQWIDACTSQPCANGSTCTVSGNKFSCTCLAGYTGQ
KCEIDVNECATPGLCQHGGTCVNLPGSYRCQCKPGYTGHRCESVYVPCSPSPCMNGGTCH
QTSDFTFECNCLPGFEGSVCGHNVDDCPNHKCLNGGVCVDGVNTYNCRCPPQWTGQFCTE
DVDECQLQPNACQNGGTCTNHNGGYACVCVNGWSGDDCSKNIDDCFTASCANGSTCIDRV
ASFSCICPEGKAGLLCHLDDACVSNPCQKGALCDTNPVNGNYICTCPQGHKGADCTEDVD
ECAMANSNPCEHAGKCVNTEGSFHCECLKGYTGPRCEMDINECHSNPCQNDATCLDKIGG
FTCLCMPGFKGVHCEEDIDECLSNPCVNNGVCLDKVNRFLCVCPPGFSGAVCQIDIDDCS
STPCLNGAKCIDHPNGYECQCATGFTGLLCEENINNCDPDPCHHGECQDGIDSYTCICNP
GYMGAICSEQIDECHSNPCLHQGRCIDLVNGYQCNCLLGTSGVNCENNFDDCASNPCIHG
DCIDGINRYNCACKPGFTGPRCNADIDECTSSPCHNGGTCINEVNGFRCVCPEGFHHPHC
QSQADGCLSNPCVHGNCTHIATGYKCVCDPGWIGDYCSTEGNECKSNPCQNGGTCEDLLN
GYRCTCRKGFKGVNCQVVVSPCSPNPCENSGICQESPDSEGYTCQCAPGWEGERCTVDID
ECLSKPCKNHALCHNIQGSYLCECRPGFTGGDCDSNIDDCLSNPCQNGASCVDGINSFSC
ICLPGFHGDKCQTDTNECLSEPCRNGGTCTHYVNSYTCKCPPGFEGTNCENNIDECTESS
CFNGGTCVDGINSFTCQCPLGFTGPFCLTEINECDSHPCLNRGTCLDSLGTYRCICPLGY
TGKNCKSLMDLCSKSPCKNKGTCVQTLAQTRCVCPPGWTGAYCDVPNVSCQVAASQRGVP
VDQLCQHSGHCLNVGNTHHCQCQVGYTGSYCEVQLDECESSPCQNGATCRDHLGGYQCEC
VAGYQGVNCEYEVDECQFQPCQNGGTCIDLINHFKCSCPPGTRGRFCEENVDDCVSDSGV
PRCFNGGQCIDQIGGYSCLCPQGFAGERCEGDINECLSNPCNPRGSLDCVQLTNDYRCIC
RSAFTGRHCESVIDVCPRKPCQNGGTCAVASNMPDGFICQCPPGYSGAKCEFSSHSTCGQ
VKCKKGEQCIQTSSGPRCYCPKLSVGEECQTNPGCASAPCQNGGSCHPHSQPPYYYCQCP
VHTQGSHCEQPVTFSPEPRGCLDSQCAEKARDGYCDEDCNTHACQWDGGDCSLTMEDPWA
NCSSSLRCWMLFNGQCDEFCNTPECLFDNFECQQNSRTCKYDKYCADHYADGRCDQGCNS
EECGWDGLDCAGDKAEKLAEGTLIIVVLMPPDELLGDVRSFLRTLGTLLHTNLRIKLDSQ
GNPMVFPYYGEKSAARSRRSLVVVRKHRELEQEVIGTKVFLEIDNRQCAEDSEQCFHNTE
AAAALLAAQAIKGMLPYPFVSVQSEPLLPPKTQLLYLLAVAALIILVILLLGVMMAKRKR
KHGSLWLPEGFILRRDPSNHKRREPVGEDAVGLKNLSVQIPEGNLADPGTTEHWAGDGGP
QPKRAKAEDQALLPEGDEQIDQRQWTQQHLEAADVCGSTSLALTPPQADQEVDVLDVNVR
GPDGCTPLMLASLRAGGSDISEDDEDGEDSSANIITDLIYQGANLQAQTDRTGEMALHLA
ARYSRADAAKRLLDAGADANARDNMGRTPLHAAVAADAQGVFQILIRNRVTDLDARMNDG
TTPLILAARLAVEGMVAELINCQADVNAVDDHGKSALHWAAAVNNVEATLVLLKNGANRD
MQDNKEETPLFLAAREGSFEAAKILLDHFANRDITDHMDRLPRDVAQDRMHHDIVQLLNE
YNVAHSPAGHPGAMLNSALSPVICGPNRSFLNLKHASLSKKSRKPNAKGMPTSLTKDAKR
RRKKSLSEGKGQFSESSVTLSPVDSLESPHAFASEPTSSPVMPSPGVLHSSPSSLLTAPS
VQAAHTMSFSNLHEMQPLGRGSSTVLPSVSQLLSQHRTTPPNSGLGRLRPGNVSTEWMNR
MEVNESQYNEMFGMVPQVMHAHPSVSQQSGLVQADAKHLGVSRESLPPIMTFQLVPKGSI
NQQALPQQAQSNCAQNMAGPLSSMYQIPDLAQMPSASFSMAAIPQQDGQVAQTVLPAYHQ
FQSSMGKYPTPPSQHSCYSSATERTPSHNRHLQGEHPYLTPSPESPDQWSSSSPHSASDW
SDVATSPSNNQRGPAAAHMTEQQRNNMQVYA
NT seq
7296 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcggagcggggcccgcgctcgccgcgctcctcgccctggtgctggccgtgctg
cgccgcgccgagcccgccgccgctctgcagtgtatggatgattccaagccatgtgttaat
gagggaaagtgcattccatatcaaaatggtacaggatattgcaagtgtcgagaaggcttt
cttggagactactgtcagtacagaaacccctgtgaaagcaatacctgtaagaatggggga
acttgtgaagctgcatccctgataggaaaaccgacctgcaagtgtgctccgggattcaca
ggggaggaatgtcagtactcggaatctcacctttgctacgtgtcccagccctgcctgaat
ggaggcacttgtcacccccacagccaggacacgtacgagtgtgtctgtcttccaggtttc
acaggaaaggaatgccagtggattgatgcctgtacatctcaaccttgtgccaatgggagt
acatgcactgtgtctggaaataagttctcctgcacctgcctggctggctacactggccag
aagtgtgagatagatgtgaatgaatgtgccacgccaggcctgtgccagcacggtgggacc
tgtgtcaatctgcccggttcctaccggtgccagtgcaagccgggttacacaggacaccgc
tgcgagagcgtgtacgtgccctgctccccgtcaccctgcatgaacgggggcacctgccat
caaaccagtgacttcaccttcgagtgcaactgcctgccaggtttcgagggaagcgtctgt
ggacacaacgtcgacgactgcccgaatcacaagtgcctgaacgggggggtttgtgtggat
ggggtgaacacctacaactgccgctgcccgccccagtggacaggccagttttgcactgag
gatgtggatgaatgccagctccagcccaatgcctgccagaacgggggcacctgcaccaac
cacaacgggggctatgcctgtgtctgtgtcaatggctggagcggggacgactgcagcaag
aacatcgatgactgcttcactgcctcctgtgccaatggctccacctgcattgacagagtg
gcttctttctcatgcatttgtccagagggaaaggcaggtcttctgtgccacctggatgat
gcctgtgttagcaatccgtgccagaaaggtgctctgtgtgacaccaaccctgtgaatgga
aactacatctgcacctgtcctcaaggccataagggagcagactgcactgaggatgtggat
gaatgtgcaatggctaacagcaatccgtgtgaacacgccgggaaatgcgttaacacagag
ggctccttccactgcgagtgtttgaagggctacacaggacctcgctgtgagatggacatc
aatgagtgccactcaaatccgtgccaaaatgatgccacctgcctggataaaattggaggg
ttcacgtgtctctgtatgccaggttttaaaggtgttcactgtgaagaagatattgatgaa
tgtctgagtaatccctgtgtgaacaatggagtgtgtcttgataaagtcaaccgcttcctc
tgtgtctgtcctcctggattcagtggtgctgtgtgtcagattgacatagatgactgttcc
agcacgccgtgtctcaatggagccaaatgtattgaccaccccaatggctacgagtgccag
tgtgccacaggttttactggccttctctgtgaggagaatatcaacaactgtgatcctgat
ccttgccaccatggggaatgccaggatgggattgattcctacacgtgtatctgtaatcct
ggctacatgggtgccatatgcagtgagcagatagacgagtgccacagcaatccttgcctc
catcaagggcgctgcatcgacttggtcaatggctaccagtgcaactgtttgctgggcacc
tcaggagtaaactgtgaaaataactttgacgactgtgccagtaacccctgcattcacggg
gactgtattgatggcattaatcgctacaactgtgcctgcaaacctggatttacaggcccc
cgctgtaatgcagacatcgacgagtgcacatccagcccttgccacaacggtgggacgtgc
atcaacgaggtgaacggctttcggtgtgtgtgtcctgagggcttccaccatccccactgc
cagtcccaggcagatggctgcctcagtaacccctgtgtgcatggcaactgcacacacatt
gctactgggtacaagtgtgtctgcgaccccggctggataggagattactgttcaacagaa
gggaatgagtgtaaatcaaacccatgccagaatggaggaacttgtgaggatctgttgaat
ggatacagatgtacctgtaggaaaggattcaaaggtgtgaactgccaggtggtggtttct
ccttgttcccctaatccttgtgagaactcgggaatctgccaagaatctcctgactctgaa
ggctacacctgccaatgtgcccctggctgggaaggggagagatgtacggtggatattgat
gagtgtctctccaagccctgcaaaaaccatgctctgtgccacaacatccagggcagttac
ctgtgtgaatgtcggcctggcttcactggaggggactgtgacagtaacatcgatgactgc
ctttcaaatccctgccagaacggagcttcgtgcgtggatgggataaactccttctcgtgc
atctgcctgcctggatttcatggggataaatgtcaaacagacaccaatgagtgtctgagt
gagccgtgcaggaatgggggcacgtgcacccactatgtcaacagctacacctgcaagtgc
ccgcctgggtttgagggaaccaactgcgagaacaacatcgacgagtgcactgagagctcc
tgtttcaatggaggcacttgtgtggatggaatcaattccttcacctgccagtgtcccttg
gggtttacgggacccttctgcctcacagaaatcaatgagtgtgactctcatccttgcctg
aacaggggcacctgtttggacagtctgggcacatacaggtgtatatgtcccttgggctac
actggcaagaactgcaagtcacttatggacctgtgcagcaagtctccctgtaagaacaaa
ggcacgtgtgtccagactctggcccagactcggtgtgtctgtccacctggctggactggt
gcttactgcgacgtgcccaatgtctcgtgtcaagtggcagcttcacagagaggagtccca
gtggaccagctgtgccagcactctggtcactgcctcaacgtggggaacacccaccactgc
cagtgccaggtgggttacacgggcagttactgcgaggtgcagctggatgagtgtgagtcc
agcccctgccagaacggagccacctgccgggatcacctgggtggataccagtgcgagtgt
gtggctggataccagggtgtcaactgtgaatatgaagtggatgagtgccagttccagccc
tgccagaacggagggacgtgcatcgacctcatcaatcatttcaagtgctcctgcccacca
ggaactcggggccgtttctgtgaggagaatgttgatgactgcgtttcagactcgggagtt
ccccgctgcttcaatggagggcagtgcattgaccagatcgggggctacagctgcctctgt
cctcaaggcttcgcaggagagcgctgcgagggggatatcaacgagtgcctctccaatcct
tgcaaccctcgagggagcctggactgtgtccagctgacaaatgattataggtgcatctgt
cgcagtgccttcactggtcgtcactgtgagagtgtgatagacgtgtgtccccggaagcct
tgtcagaacggcggtacctgcgctgtcgccagcaatatgcccgatggcttcatctgccag
tgtcctccgggttattctggagcaaaatgtgagttcagcagccacagtacttgcggacaa
gtgaaatgcaagaagggggagcagtgcatccaaacatcttctggtccccggtgctattgc
ccgaagctgtctgtgggagaggaatgccagactaacccgggttgtgccagtgccccctgc
cagaatgggggcagctgccaccctcattctcagcctccttactattactgtcagtgccct
gtccacacccagggcagccactgtgaacagcccgtaactttcagcccggagccgcgagga
tgtctggattcccagtgtgcagaaaaagccagggatggctattgtgatgaagactgtaac
actcatgcgtgccagtgggatggaggcgactgctccctgacaatggaggatccttgggcc
aactgctcctcctcgctgcgctgctggatgcttttcaatggacagtgtgacgagttctgc
aacacgcccgagtgcctgtttgacaactttgagtgtcagcaaaatagcaggacatgcaag
tatgacaagtactgtgcagatcactacgcagatgggcgctgtgaccagggctgcaacagc
gaggagtgcggctgggacggcctggactgcgctggggacaaggctgagaagctggcagaa
ggcaccctgatcatcgtggtcctgatgccccctgacgagctgctgggggatgtccgcagc
ttcctgcgcactctgggaacgctcctgcacaccaacctgaggattaagctggactcccag
gggaaccccatggtatttccatactatggggagaaatcagcagcacggagccgtcgatcg
ctcgtggtcgttcgcaagcacagagaactggagcaagaggttattggcaccaaggtgttc
ctggagattgacaaccgccagtgtgcagaggattcagagcaatgctttcacaacacagaa
gctgctgcagctctcttagctgctcaggccatcaagggcatgttgccctatcctttcgtg
tctgtccaaagtgagcccttgttaccaccaaagacccagctgctttacctgcttgctgtg
gcagctttgatcatcctggtaatccttctcttgggtgtgatgatggcgaagcgtaagcgc
aaacatggttctctgtggctcccagagggatttatcctgcgcagggatcccagtaaccat
aaacgcagagagcccgttggggaagacgctgttggactcaaaaatctgtcagtccagata
ccagagggtaacctggctgatcctgggacaactgagcactgggcaggtgatggtgggcct
cagccaaagagagctaaggctgaggaccaggccttgctgccagaaggtgatgagcagata
gaccagcgccagtggacacagcaacacctggaggcagcagatgtctgcgggagcacctca
ctcgccctcacaccccctcaggcagatcaagaagtggatgttctggatgtcaatgtcaga
gggccagatggatgtactccgctgatgttggcatctctgcgtgcgggtggctccgacatc
agcgaggatgacgaggacggggaagactcctcagcaaacatcatcacagatttgatctac
cagggagccaacctgcaggcacagacagaccgcactggggagatggctctgcacctggca
gcccgttactccagagctgacgctgccaagcggctcctggatgctggggcggatgccaat
gctcgggacaacatgggacggacacccctgcacgcagctgtggctgctgacgcccagggg
gtcttccagatcctgatccgtaacagagtgacagacttggatgctcggatgaatgatggg
acgaccccattaattctggctgcacgtctggctgtggaagggatggtggccgagctcatt
aattgccaggctgatgtgaatgccgtagatgaccacggtaaatctgctcttcactgggct
gctgctgtcaacaacgtggaagcaacactagtactgctgaaaaatggagccaacagagac
atgcaggataacaaggaggagactccactcttccttgctgctcgggaaggcagtttcgaa
gccgcaaaaatcttgctggaccattttgccaaccgagacatcacggaccacatggaccgg
ctgccccgggatgtggcccaggaccggatgcaccacgacatcgtgcagctcctcaacgag
tacaatgtggcccacagccccgccgggcaccccggggccatgctgaactctgccctctcc
ccggtcatctgtggccccaacaggtccttcctcaacctgaaacacgcttcactaagcaag
aagtcgcggaaaccgaatgccaaaggcatgcccaccagcctcaccaaagatgcaaagagg
agaaggaagaagtccctcagcgaggggaaggggcagttttcggagagctcagtgaccctg
tcaccggtggattctctggaatcgccccatgcttttgcatctgaaccaacctcttctcct
gtgatgccttcaccaggggtgctgcactcgtcacccagctcgctgctgaccgctccatcg
gtgcaggctgcgcacaccatgtccttctccaacctccatgagatgcagcccttgggacgt
gggtccagcacggtgctcccatctgtcagccagctgctctcacagcacagaaccacccct
cccaacagtgggcttggcaggctccggccaggcaacgtctccaccgagtggatgaaccgc
atggaggtgaacgagtcccagtacaacgagatgtttggcatggtgccccaggtgatgcat
gcccaccccagtgtttctcagcagagcggcttggttcaagcagacgcgaagcacctgggg
gtatccagggagtctttgccacccatcatgactttccagctggttcccaagggcagcata
aaccagcaagcactgccgcagcaggcccagtcaaactgcgctcagaacatggctggccct
cttagctccatgtaccagatcccagatctagcccagatgcctagcgcctcgttctccatg
gctgccatccctcagcaggatgggcaggtggctcaaacagtcctcccggcctaccaccag
ttccagagctcgatggggaaataccccacgcctccctcccagcacagctgctactcctcg
gccacagaacggactcctagccacaaccggcacttacaaggggagcacccgtacctgact
ccgtcgcccgaatctccagatcaatggtcaagctcttccccacactctgcctctgactgg
tctgacgtggcaaccagtcccagtaacaaccagcgcgggccagcggccgctcacatgaca
gagcagcagcggaacaacatgcaggtgtacgcctga
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integrated database retrieval system
