Aphelocoma coerulescens (scrub jay): 138113718 Help Entry 138113718         CDS       T10543                                  Symbol PTCH2 Name (RefSeq) protein patched homolog 2   KO K11101   patched 2 Organism acoe  Aphelocoma coerulescens (scrub jay) Pathway acoe04340   Hedgehog signaling pathway Brite KEGG Orthology (KO) [BR:acoe00001]  09130 Environmental Information Processing   09132 Signal transduction    04340 Hedgehog signaling pathway     138113718 (PTCH2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Sterol-sensing TRA2_N Patched Motif Other DBs NCBI-GeneID:  138113718 NCBI-ProteinID:  XP_068878435 LinkDB All DBs Position 8:complement(23428756..23449665) Genome browser AA seq 1354 aa AA seqDB search MPAEPPRAAPPPLRAARRKPLPEGRAVGQRTPLWLRARFQALLFALGCRIQRHCGKVLFV GLLVFGALAVGLRVASIETDIEHLWVEAGSRVSQELRYTKEKLGEESVYTSQMLIQTPKR DGDNILTQEALQLHLEAALAASKVQVSLYGKSWDLNKICYKSGVPIIENGMIERMIEKLF PCVILTPLDCFWEGSKLQGGSAYLPGRPDIQWSNLDPLQLMEELGQFTSLEGFKELLDKA EVGQAYMERPCLDPQDPQCPPSAPNKQSQQSPDIPAELSGGCHGFSRKFMRWQQELILGG TTKDSQGKLLRAEALQTMFLLMSPRQLYEHFKDDYEIHDISWSEEKAGAILEAWQRKFVE LAQDSIPPNATQSVHAFSTTTLNDIMKSFSDVSVIRVAGGYLLMLAYACVTMLRWDCSKS QGAVGLAGVLLVALSVASGLGLCSLLGISFNAATTQVLPFLALGIGVDDMFLLAHAFTEM SQHIPFKERTGECLKRTGTSVALTSVSNMIAFFMAALVPIPALRAFSLQAAVVVVFNFAM VLFVFPAILSLDLHRREKRRLDILCCFYSPCSSRVIQIQPQELADANDNHACHPSPYGHP GMATSTQITTTVQAFTRCDPSGHHIVTVLPPTSQVCTSPAVLLPHADPLGSQVFAPSSST RDLLSQLDEAKGGRECVPLPFCRWSLADFAREKYAPLLLRTRTKAVVVVLFLALLGLSLY GTTMVHDGLYLTDIVPRDTKAHAFISAQFKYFSFYNMFIVTKGGFHYPGAQAALLSLHQA FSTVKYVVREGNRDLPKMWLHYFQDWLRGLQATFDRDWQAGRITHDSYRNGSEDGALAYK LLIQTGNKKEPFNFNQLTTRRLVDENGIIPPDTFYICLTVWASNDPLGFAASQANFYPPP PEWIHDKYDTTGENLRIPAAQPLEFAQFPFYLSGLRRTSDFVEAIESVRAICREAAQRHG VLSYPSGYPFLFWEQYIGLRHWFLLAISILLACTFFVCALLLLNPWTAGIIVSILAMMAV ELFGIMGLMGIKLSAIPVVILIASVGIGVEFTVHVALGFLTAAGSRNVRSAAALEHTFAP VMDGAVSTLLGVLMLAGSEFDFIMRYFFAVLTILTLLGLLNGLVLLPVLLSVIGPPPEAS LVDNGPCLPPPESVPPCLGPGAMYVRRAPAWPATFPEPSDTEHYTESVGPGSPRGPFIVP PAPAHILLEAGKDPSFPRITVLKPYKDSLEIQGKKEASGPQPAAPLPFGEPCTTLPREHP QPGPPGTRPAPPTALPTYSTHLQGPAGSYTTVTATASVTVALHPTLPGSYPNFSPEGFTS SERDCLDEPSTSGTAVPDTFEMQNMGHHGAGARR NT seq 4065 nt NT seq  +upstreamnt  +downstreamnt atgccggccgagcccccccgcgccgcgccgccgccgctccgcgccgcccgccgcaagccg ctgcccgagggcagggccgtgggccagaggaccccgctgtggctgcgggcccgctttcag gcgctgctcttcgccctgggttgccggatccagcggcactgcgggaaggtgctcttcgtg gggctgctggtgttcggggcgctggccgtgggactacgggtggcctccatcgagaccgac atcgagcacctctgggtggaagcgggcagccgtgtgagccaggagctgcgctacaccaag gagaagttgggcgaggagtccgtctacacctcccagatgttgatccagaccccgaagagg gatggggataacatcctgacgcaggaggccctgcagctccacctcgaggcggccctggct gccagcaaggttcaagtctcactgtacggaaaatcgtgggatttgaacaagatctgctac aagtcgggtgtccccatcattgagaacggcatgatcgagaggatgatagagaagctgttc ccctgtgtgatcctgacaccactggactgcttctgggagggctccaagctgcagggaggc tcagcctatctcccgggccgcccagacatccagtggagcaacctggaccctctgcagctg atggaggagctggggcagttcacatccttggaaggcttcaaagagctgctagacaaggca gaggtgggacaggcttacatggagcggccctgcctggatccccaggacccccagtgtccc cccagtgcccccaacaagcagagccagcagagccccgacatcccggctgaactctcgggg ggctgccacggcttctccaggaagttcatgcgctggcagcaggagctgattttaggcggc acaaccaaagactcccagggcaagctgctacgcgccgaggccctgcagaccatgttcctc ctcatgagcccccggcagctctatgagcacttcaaggatgactacgagatccatgacatc agctggagcgaggagaaggcgggagccatcctggaagcctggcagaggaaatttgtggag ctggcacaggactccatccctcccaacgccacacagagcgtccacgctttctccaccacc acgctcaacgacatcatgaagtccttctctgacgtcagcgtcatccgggtggctgggggc tacctcctcatgctggcctacgcctgtgtcaccatgctgcggtgggactgctccaagtcc caaggggctgtgggcctggctggggtcctgcttgtggctctctccgttgcctctggcctg gggctttgctcactgctgggcatctccttcaatgcagccaccacccaggtcctgcccttc ctggccctcggcattggggtggatgacatgttcctcttggctcacgcctttactgagatg agccagcacatccccttcaaggagcggacgggcgagtgtctgaagcgcacggggaccagt gtggctctcacctctgtcagcaacatgatcgccttcttcatggcagccctggtgcctatc cctgctctgcgcgccttctccctccaggctgcagtggttgtggtgttcaacttcgccatg gtgctctttgtttttcctgctatcctgagcctggacctgcaccgccgggagaaacgccgg cttgacatcctctgctgcttctacagcccttgctcctcgcgggtcatccagatccagccc caagagcttgctgacgccaacgacaaccacgcttgccacccatctccttatgggcaccct ggcatggccaccagcacccagatcaccaccaccgtgcaagccttcacccggtgtgacccc tcaggccaccacattgtcaccgtcctgccacccacctcccaggtgtgcacctcacctgct gtcctcctgccgcacgctgaccctttgggctcgcaggtcttcgccccatccagctccacc cgggatctgctgtcccagctggatgaggccaagggtgggcgggagtgtgtccccctgccc ttctgtcgctggagcctcgctgacttcgcccgggagaagtacgccccgctgctcctgcgc acccggaccaaggcggtagtggtggtgctgttcctggcgctgctggggctgagcctctat ggcaccaccatggtgcatgatggcctctacctgacggacatcgtgccacgggacaccaag gcacacgctttcatctcagcccagttcaagtacttctccttctacaacatgttcattgtc accaagggtggcttccattacccgggtgcccaggctgccctgctgagtctgcaccaggcc ttcagcaccgtcaagtatgtggtgcgggagggcaaccgcgacctacccaaaatgtggctc cattacttccaggactggctacgagggctccaggccacctttgacagggactggcaggcc gggcgcatcacccatgacagctaccgcaacggctccgaggatggggcactggcctacaag ctcctcatccagactggcaacaagaaggagcccttcaacttcaatcagctgaccacgcgg cggctggtggatgagaatggcatcatcccccctgacaccttctacatctgcctgacggtg tgggccagcaacgaccccctgggctttgccgcctcccaggccaacttctaccccccaccc cctgagtggattcatgacaagtacgacaccacgggcgagaatctgcgaatcccagcagcc cagccgctggagttcgcccagttccctttctacctgagcgggctgcgtcgcacgtctgac ttcgtggaggcgattgagagcgtacgggccatctgccgggaggccgcccagcgccacggc gtgctgagctaccccagcggctaccccttcctcttctgggagcagtacattggcctgcgg cactggttcctgctggccatcagcatcctactggcctgcaccttcttcgtctgcgccctg ctgctgctcaacccctggaccgccggcatcatcgtctccatcctggccatgatggctgtg gaattgtttggcatcatggggctgatgggcatcaagctgagcgccatccccgtggtcatc ctcatcgcctcggtgggcattggtgtggagtttacagtccatgtggccctgggattcctg acagctgcggggagcaggaacgtgcgctcagccgcagcactggagcacacttttgcccct gtgatggatggtgctgtctccaccctcctgggtgtcctcatgctggctggttctgagttt gacttcatcatgaggtatttctttgcggtgctgaccatcctgacgctgctggggctgctc aacgggctggtgcttctgcccgtcctgctctctgtcatcgggccaccccctgaggcatcc ctggtggataatggcccctgcctacccccaccggagtcagtacccccatgcctgggccct ggggcaatgtatgtccggcgagctccagcctggcccgccaccttccctgagccctcggac acagagcactacacggagagcgtggggccaggcagcccacggggacccttcatcgtgccc cccgccccagcacacatcctactggaggctggcaaggaccccagcttcccccgcatcact gtgctgaagccctacaaggacagcctggagattcaggggaagaaagaggcttctggccct cagcctgcagcccccctgcccttcggggagccgtgcaccaccctgccccgagagcacccg cagcccggcccgccaggcacccggccagccccccccacagccctgcccacctacagcacc cacctgcagggtcctgccggcagctacaccaccgtcacggccactgcgtcggtgacggtg gccctgcaccccacactgcctggctcctaccccaacttcagccctgagggcttcaccagc agtgagcgggactgcctggacgagcccagcaccagtggcactgctgtgcctgacaccttt gagatgcagaacatgggacaccacggggcaggtgcccggcgctag

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