Aphelocoma coerulescens (scrub jay): 138113831
Help
Entry
138113831 CDS
T10543
Symbol
COLGALT2
Name
(RefSeq) procollagen galactosyltransferase 2 isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe00310
Lysine degradation
acoe00514
Other types of O-glycan biosynthesis
acoe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
138113831 (COLGALT2)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
138113831 (COLGALT2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
acoe01003
]
138113831 (COLGALT2)
Enzymes [BR:
acoe01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
138113831 (COLGALT2)
Glycosyltransferases [BR:
acoe01003
]
O-Glycan biosynthesis
O-linked Gal type
138113831 (COLGALT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Aminotran_4
Motif
Other DBs
NCBI-GeneID:
138113831
NCBI-ProteinID:
XP_068878754
LinkDB
All DBs
Position
8:5303590..5354093
Genome browser
AA seq
623 aa
AA seq
DB search
MAASAPLVLLLLLLLLRGCGAAPEPPEPPEPPEPPGPEPPALPESALLQPTVLLAILARN
AAHTLPYVLGCIERLSYPKSRIALWAATDHNIDNTTAILREWLKNVQHLYHDVEWRPMEE
PLSYPEEIGPKHWPSSRFTHVMKLRQAALRAAREKWSDYILFIDADNLLTNPQTLNLLIA
ENKTLVAPMLESRSLYSNFWCGITPQGYYKRTLEYPLIREWKRMGCFAVPMIHSTFLIDL
RKEASTKLMFYPPHQDYTWSFDDIMVFAFSSRQAGVQMFLCNREHYGFLPMPLKPQQSLQ
EEAENFVHTLIEAMIDRPPVEPSQYISVPPKHPDKMGFDEIFMINLKRRKDRRDRMLRTL
YEQEIAVKVVEAVDGKALNTSQLKALSIEMLPGYRDPYSSRPLTRGEIGCFLSHYYIWKE
VVSRGLEKTLIIEDDVRFEHQFKRKLMKLMDDIEQAQLDWELIYIGRKRMQVQEPERAVP
NVRNLVEADYSYWTLGYAISFHGAQKLIRAEPFSKMLPVDEFLPIMYNKHPVTKYMEYYE
SRDLKAFSAEPLLVYPTHYTGQPGYLSDTETSTIWDNETVSTDWDRTHSWKSRQQGKIHS
DAQNKDALPSQSSFNAPSSRDEL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgagcgcgccgctggtgctgctgctgctgctgctgctgctgcgcggctgcggg
gccgcccctgagccccccgagccccccgagccgcccgaaccgccgggccccgagccgccc
gcgctgcccgagtcggcgctgctgcagcccaccgtgctgctcgccatcctcgcccgcaac
gccgcgcacacgctgccatacgtcctgggctgcatcgagaggctcagctaccctaagagc
cgcatcgcgctctgggcagccactgaccacaacattgacaacaccacagcaatcctcagg
gagtggctgaagaatgtgcagcacctgtaccacgatgtggagtggaggcccatggaggaa
cccctgtcttacccagaagaaattgggccaaaacattggccaagctcccgattcactcat
gtgatgaagctgcgacaggctgccctgcgtgctgcccgggagaagtggtcagactatatc
ctgtttattgatgcagataacttactgaccaacccccagactctgaacctgctgatagca
gaaaacaagacactggtggcaccgatgcttgagtcccgctccctctactccaacttctgg
tgtggcatcactccccagggctattacaagaggaccttggagtatcccctcattcgggaa
tggaagaggatgggctgttttgctgtccccatgatccattccacattccttattgacctg
aggaaggaggcctccaccaagctgatgttctaccccccacaccaggactacacctggagc
ttcgatgatatcatggtctttgccttctccagtcgccaagcaggagtacagatgttcctc
tgcaaccgtgagcactacgggttccttcccatgcccctgaaaccgcagcagtcactgcag
gaggaagctgagaactttgtgcacaccctgattgaggccatgatcgatcgccctcctgtg
gagccctctcagtacatctctgtccctccgaagcaccctgacaagatggggtttgatgaa
attttcatgatcaacctgaagcgtcgcaaggaccggcgagatcggatgctgcggacactt
tacgagcaggagattgcagtgaaggtagtggaggctgtggatggaaaagcactgaacacg
agtcagctcaaagctctcagcatcgaaatgctgccgggataccgggacccatattcctcc
aggcccctgaccagaggagagattggctgcttcctgagccactactacatttggaaggag
gtggtgagcagaggcctggagaagacactcatcattgaggatgatgtgcgctttgagcac
cagttcaagaggaagctcatgaagctgatggacgacatcgagcaagcccagttagactgg
gagctgatctacattggccggaaaaggatgcaggtgcaggagcccgagagagctgttccc
aatgtccggaacctggtggaagctgattactcctactggaccctggggtatgcgatctcc
ttccatggggctcagaagctcatcagggctgagcccttcagcaagatgctgcctgtggat
gaattcctgcccatcatgtacaacaagcaccctgtcacaaagtatatggagtactatgag
tccagagacttgaaggccttttcagcagaaccccttcttgtttaccccacacactacacg
gggcagccgggctacctcagtgacacagagacctccaccatctgggacaacgagacagta
tcaacggactgggacagaacacactcctggaagtcccggcagcagggcaagatccacagc
gacgcccagaacaaggatgccctgccctcccagtcatcctttaacgccccgtcatccagg
gatgagctatga
DBGET
integrated database retrieval system
