Aphelocoma coerulescens (scrub jay): 138113839
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Entry
138113839 CDS
T10543
Symbol
SEC16B
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec16B
KO
K20353
COPII coat assembly protein SEC16
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acoe04131
]
138113839 (SEC16B)
Membrane trafficking [BR:
acoe04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
138113839 (SEC16B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
138113839
NCBI-ProteinID:
XP_068878773
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All DBs
Position
8:1735898..1852684
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AA seq
1057 aa
AA seq
DB search
MWKWTLEVATGSRRRAPAASEQATKAIWGLSSPKREDFAGKPVMEPWAPVQPPQPWERPA
ARGPWAEGLHGPPAPLRRQLLRAGQAPRPGSWHGSHLPGHPRDEGHHPRGDTRRLASRAE
RCDSGYPSQPCSRQGYEDPPWQYSAAGYGDGYPYQSHQWQPVAWQDDRDLRQRESYGKSY
RDQHYYRGYHPNLATGPPGQDRTQTYSSYEESYISTARREGTGGGTLSSDSGEAGGQPEE
PSGQPSLLLQYHESGLSSSSHELSQYIRDGADHYDPVLPGSWNVGQTGGPSMSTLTPAVP
LKFPELHTALCFGAGGHLVLACPQCPAEGRPARVELHSLEAILHGTEELEELQAFPGPLA
REDLHKVDVMTFCQQKITTGCDLSTQRGRDSSLLWKLLVLLCRQNGSMVGSDTAELLMQD
CRRQDKYKRQDPAMGLTDDEWASRQPGTLDLITGEVPPVVETQAQIVEKFTKLLYYGRKK
EALVWAMRNQLWGHALFLSSKMDPRTYSWVLTGFTSTLATNDPLQTLFQLMSGRIPQAAL
CCGDATWGDWRPHLAVMLSNKVGDTELNQRAIVTMGDTLASKGAVEAAHFCYLMADIPFG
YFGAKADRMALLGSSRRQAFSQFARTEAIQRMEIFEYCQQLRQPESFLLPFQAYKLLYAS
RLADHGLPAQALQYCEHIGTALLRRDPAAHPVLARQVVRLAERLKLCDPLLLEMPEQDQE
LEPDWLDQLRACCQEWEVEDALPPEAAPAQLELPCAVLPMADGEPGNEIPQSEDYQYDQW
FEPVPPQAPSSQEDVSLWSPAPAQVVASPLPSVGRELQPPGPGQGTRAPPGGDSAEPPPQ
PVLPAGEAGEPWGARLSPGELQPALPEEQEELPTRIRTVSETSTVSLGDSRPSLDSADED
AAQELAEAMKPEEDKSSGFRWFGWFRSKPTKETSPKAESETDPDSLTSGPQEQTSPSPPD
APLPAGTNPIAQPLARNPGGTQGESTSAVSPVPAEVKGSWEEDGGQSAGQQSFKTGYPGP
LPPLASIPLFNPAQVSRLAARPTQPRLLSQHRYPKPL
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagtggactttggaagtggcaacagggagcagacgcagggccccggcggcctct
gagcaggccactaaagccatttggggcttaagctcccccaaaagagaggattttgctggc
aagcctgtgatggagccctgggcccccgtccagccgccccagccctgggagaggccggca
gcccgggggccatgggcagaggggctccacggccccccggcaccgctccggcggcagctc
ctgcgcgcagggcaggctcctcgccccggctcctggcacgggagccacctccccggccac
ccccgagacgagggccaccacccccggggtgacacccgccgactggcgtcccgcgccgag
cgctgtgacagcggctaccccagccagccctgctccaggcaaggctatgaagaccccccc
tggcagtactcagcagctggctacggggatggctacccctaccaaagccaccagtggcag
ccggtggcatggcaggatgacagagacctgagacagcgagagtcttacggcaagagttac
cgggaccagcactactacaggggctaccaccccaacctggccacgggccccccagggcag
gacaggacacagacctacagctcctatgaggagagctacatctccactgccaggagggaa
gggacagggggaggaaccctcagcagtgactcaggggaggctggtggccagcccgaagag
ccctcgggccagcccagcctgctcctgcagtaccacgagtcaggactcagctccagcagc
catgagctcagccagtacatccgtgatggtgccgaccactacgaccctgtgcttccaggg
tcctggaacgtgggacaaacaggggggccctcgatgtccaccctgaccccagcagtgccc
ctcaagttcccagagctgcacactgcactgtgctttggagccgggggccacttggtgctg
gcgtgtccccagtgccctgccgagggacggccagcccgtgtggagctgcacagcctggag
gcaattcttcatggcacagaagagctggaggagctgcaagccttcccagggcccctggcc
agggaagatctgcacaaggtggatgtgatgacgttttgccagcagaagataaccacaggc
tgtgatctctcaacacagaggggcagagattcctctctcctctggaaactcctggtcctc
ctctgccggcagaacgggtccatggtgggctcggacacggcggagctgctgatgcaggac
tgcaggcgccaggacaagtacaagaggcaggaccctgcgatgggcctgacggacgacgag
tgggcgtcgcgccagccgggcacgctggacctcatcactggggaggtccctcccgtcgtg
gagacacaggcacagatagtggagaagttcaccaagctcctctactatggcaggaagaaa
gaggctctggtctgggccatgagaaaccagctatggggccatgccctgttcctctctagc
aagatggaccctcggacatacagctgggtcctcactgggttcaccagcacactggccacc
aacgacccgctgcagaccctcttccagctcatgtcgggaaggatccctcaggcagcactg
tgctgcggggatgccacgtggggggactggaggccccacctggctgtgatgttgtccaac
aaggttggagacacggagctcaaccagcgagccatcgtcaccatgggagacactttggcc
agcaaaggagcagtcgaagcagctcatttctgctacctgatggcagatattccttttggt
tacttcggagcaaaggcagatcgcatggccctgctgggcagcagccgccgccaggccttt
tcccagtttgccaggacagaggccatccagaggatggaaatttttgagtactgccagcag
ctgcgacagcccgaatccttcctgctccccttccaggcgtacaagctgctctatgcctcc
cgcctggccgaccacgggctgccagcccaggccctgcagtactgcgagcacatcggcacc
gcgctcctgcgccgggacccggccgcgcaccccgtcctggcccggcaggtggtgaggctg
gctgagcggctgaagctctgcgaccctctgctcctggagatgccggagcaggaccaggag
ctggagcccgactggctggaccagctccgagcctgctgccaggagtgggaggtggaagat
gctcttcctccagaggcggcacccgctcagctcgagctgccctgtgctgttttacccatg
gcagatggagagcctggcaatgagatcccccagagcgaagactaccagtatgaccagtgg
ttcgagcctgtgccaccccaggcacctagctcccaggaggacgtgtccctctggtcccca
gcacctgctcaggtcgtggcatcgccgctgcccagcgttgggagagagctgcagccccct
gggcctggccaagggacacgtgcccctccaggaggggattctgctgagccccctccgcag
ccggtgctgccagcaggagaagctggggagccctggggtgccaggctgtcccctggagag
ctgcagccagccctcccagaagagcaggaggagttacccacgaggatccggacggtctcg
gagacctccacagtctccctgggggacagccggccctccttggacagcgcagatgaggac
gctgcccaagagctggcggaggccatgaagccagaggaggacaagagctctggattcagg
tggtttggctggtttcggtcgaaacccaccaaggaaacttctcccaaagctgagtctgag
acagacccagactctctcacatcaggaccacaggagcagacgtcaccatccccacccgat
gcccctctcccagctggcacaaaccccatcgctcagcctctcgccagaaatcccggagga
acgcagggtgaaagtacctctgctgttagtcccgtgcctgcagaggtgaaaggctcatgg
gaggaggatggagggcagtcagcaggacagcagtccttcaagaccggctaccctggacct
ctcccaccattggcttcaatccctctcttcaacccagcccaggtgtctcggcttgctgcc
cgacccacccaacccaggctgctttcccagcatcgctaccccaagccactgtga
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