Aphelocoma coerulescens (scrub jay): 138114061
Help
Entry
138114061 CDS
T10543
Symbol
SSX2IP
Name
(RefSeq) afadin- and alpha-actinin-binding protein
KO
K06085
synovial sarcoma, X breakpoint 2 interacting protein
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04517
IgSF CAM signaling
acoe04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
138114061 (SSX2IP)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
138114061 (SSX2IP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acoe03036
]
138114061 (SSX2IP)
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
138114061 (SSX2IP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADIP
Motif
Other DBs
NCBI-GeneID:
138114061
NCBI-ProteinID:
XP_068879234
LinkDB
All DBs
Position
8:18863522..18885148
Genome browser
AA seq
581 aa
AA seq
DB search
MGDWKTITVPVLSSDSKNILSYTSEKKISPTSMNSQVLRLSLPSSKNMHSFFSAFCTEEN
LEQSISYIDRELTTLGFPSIYAESKGKELNLVSIINCMNELLVLQHRNLRAQEEVEMQHM
KLGSDMDHLQNCYAKLKEQLELSKREIVGLQERDRQLQSKNRNLHQLLKNEKDEVQKLQN
IISSRATQYNHDMKRKEREYNKLKERLHQLVMNKKDKKIAMEILNCVGRADGKRGAWRTD
KTEARNEEEMYKVLLSDYEQRQKQLLLENAELKKVLQQMKKDIISLLPPQKQKPKEKSED
GLVLSDQEEDIGELNKENMWELSCETVREQLTNSIRKQWRMLKNHVEKLDNQVSRGHSGA
LNEKDVISREDHELETEKLELEIQQCKEMIKTQQQLLQQQLTCDDDTTLLLQDCYLLEER
ERLQEEWRLFREQKKNFEKERKSFTEAAIRLGLERKAFEEDRGAWLKHQFLTMTADCNNP
NATTPSAFLRSSEPDIRLVKSASRQRKPPSVLSAPVSAEPCQTSQYIAQNSVASEKPAAD
NMPNLWVASDDKEETEECTKSWEDSGVGTLLCRNLHMEQLP
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgggagattggaagactattacagtgccggtgctgtcatcagatagcaaaaatatactt
tcatatacctcagaaaaaaagatatctcctacaagcatgaactcacaagtgctacgcttg
tcactgccttcgtccaaaaacatgcacagctttttcagtgccttctgcacagaagagaat
cttgaacagagtatatcctatattgatagggaattaacaacattgggctttccttctatt
tatgcggagtccaaaggaaaagaattaaatttagtatctatcataaattgtatgaacgaa
ttgcttgtactgcagcacaggaaccttcgagctcaggaagaagtagaaatgcagcatatg
aaactgggaagtgatatggatcacttacagaactgctatgctaagttaaaggaacagttg
gaattatctaaaagggaaatagttgggcttcaggaaagagacagacaactgcaaagcaag
aacagaaatttgcaccagttacttaaaaatgaaaaggatgaagttcagaagttacagaac
ataatttcaagtagagctacgcagtacaatcatgatatgaagaggaaagagagagaatac
aacaagttaaaggaacgcttacatcagttagtcatgaataaaaaagacaaaaagatagct
atggaaattctaaattgtgttggtagagctgatgggaagagaggtgcatggaggactgat
aagacagaagccagaaacgaagaagaaatgtacaaagttctgttaagtgattatgaacaa
cgccaaaaacagcttttactggaaaatgctgagctaaagaaagttcttcagcaaatgaag
aaagatattatttcacttcttccaccacagaaacaaaagcctaaagaaaagtctgaagat
gggctggtgctgtcagaccaggaggaagatattggagagttaaataaagagaatatgtgg
gaattatcttgtgaaactgtgcgagaacagcttaccaacagcattagaaaacagtggcga
atgttgaaaaatcacgttgaaaagctggataaccaagtgtcacgtggacattcaggagct
ttgaatgaaaaagatgtcatttcaagagaagaccatgagctagaaactgaaaagctagag
ttagagattcagcaatgtaaagaaatgatcaaaactcagcaacagctcttacagcaacag
cttacatgtgatgatgacaccactctgttactacaagactgctatttgttggaagaaaga
gagcgtcttcaggaagaatggaggttatttcgagaacaaaaaaagaattttgagaaggaa
cgaaaaagttttacagaagctgccattagattaggacttgagagaaaggcatttgaagaa
gatagaggagcatggctgaagcaccagttcttaactatgactgctgattgcaacaatcca
aatgcgacaactccaagtgccttcttaagaagttctgagccagacattcgtttagtgaag
tctgcatctcggcaaagaaaacctccctctgtgttgagtgctcctgtttcagcagaacct
tgccagacatctcagtatattgcacaaaacagtgttgcatcagaaaaacctgctgcagat
aacatgccaaatctgtgggtggcaagtgatgacaaagaagaaactgaagaatgcacaaag
tcatgggaagactctggagttggcactctgctatgtagaaacttgcacatggaacagctg
ccttag
DBGET
integrated database retrieval system
