Aphelocoma coerulescens (scrub jay): 138114163
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Entry
138114163 CDS
T10543
Symbol
RAD54L
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03440
Homologous recombination
Brite
DNA repair and recombination proteins [BR:
acoe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
138114163 (RAD54L)
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Rad54_N
Motif
Other DBs
NCBI-GeneID:
138114163
NCBI-ProteinID:
XP_068879424
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Position
8:24361832..24380268
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AA seq
745 aa
AA seq
DB search
MRRSLAPSQLAKRKAGDEDEEEEEEDWHPPTSRKRQKAASETESGECYRSPFRKPLAQLT
NRPHCLDSSQHEAFIRSILSKPFKVPIPNYKGPLGLRSLGVKRAGVRSPLHDPFEDGALV
LYEPPVLSAHDQLKIDKDKAPVHVVVDPVLSRVLRPHQREGVKFLWDCVTSRRIPGSHGC
IMADEMGLGKTLQCITLMWTLLRQSPDCKPEIEKAVVVSPSSLVRNWYNEVEKWLGGRIQ
PLAIDGGSKEEIDRKLVGFMNQRGLRVPSPILIISYETFRLHAEVLQKGSVGLVICDEGH
RLKNSENQTYQALNSLNTPRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKRHFEM
PILKGRDADASEAERHKGEERLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPL
QTELYKNFLKQAKPVEELKEGKISVSSLSSITSLKKLCNHPALIYDKCVEEEEGFMGALD
LFPAGYSTKSVEPQLSGKMLVLDYILAVTKSTSNDKVVLVSNYTQTLDLFEKLCRNRRYL
YVRLDGTMSIKKRAKIVERFNSPSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAN
DEQAMARVWRDGQKKMCYIYRLLSTGTIEEKIFQRQTHKKALSSCVVDEEQDVERHFSLG
ELKELFTLNETTTSDTHDKIKCRRCVNRHQVRPPPDGSDCTSDLSQWHHCADKRGLQDSV
LKAAWDAAVTFTFYHHSHEEQRGIP
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggagcctggcccccagccagctggccaagaggaaggcgggcgatgaagatgag
gaagaggaggaggaggactggcaccccccgacgagccggaagaggcagaaggcagccagt
gagacagagagtggggaatgctacaggtcgcccttccgcaaacccttggctcagctgacc
aacagaccccactgcctggacagcagtcagcacgaggcttttatccgcagcattttgtcc
aaacccttcaaagtccccattccaaattataaagggcccctgggcttgcgctcgctgggt
gtcaaacgggcaggagtgaggagtcctctccacgacccattcgaggatggagctctggtt
ctgtatgagcccccagtgctgagtgcccatgaccagctgaaaatagacaaggacaaggca
cctgtccatgttgtggtggatcctgtcctcagccgtgttctacgaccccatcagagagaa
ggggtgaaattcctctgggactgtgtgacgagccggcggatccctgggagccatggctgt
atcatggcagacgaaatggggctgggcaaaactctccagtgcatcacactcatgtggacg
cttctccggcaaagcccggactgcaagcccgaaatcgagaaagctgtggtggtgtctccc
tccagcctggtgagaaactggtacaatgaagtagagaaatggctggggggaaggatccag
ccactggccattgatggaggctccaaagaagagattgaccgtaaactagttggctttatg
aaccagcgtggcctgcgagtgccttcacccatcctgattatctcctatgaaaccttccga
ctccacgccgaggtgctgcagaagggcagtgttgggctggtcatatgtgatgagggccat
agactgaagaactctgaaaaccaaacttaccaggctctcaacagcttaaacacacctcga
cgagtccttatctcaggcacccccattcagaatgacctgctggagtatttcagcctggtg
cacttcgtcaattcgggcatcctgggaactgcacaggaatttaaaagacattttgaaatg
cccatcttgaaaggaagagacgcagatgcaagtgaagctgagcgacacaagggagaagag
aggcttaaagagctgatcagtattgtgaacaggtgtttaattcggagaacttcagacatc
ctgtccaaatacctgccagtgaagattgaacaggtggtctgctgcagactgacacctttg
cagactgagctgtacaagaacttcctgaagcaagccaagccagtggaggagctgaaggag
ggcaaaatcagtgtttcatctctctcttccatcacttccttgaagaagctctgtaatcat
cctgctcttatctatgataagtgtgtggaagaggaagaaggatttatgggagccctggac
ttgttccctgctggctacagcaccaaatctgtggagccccagctttcaggcaagatgctg
gttttggattacatccttgctgttaccaaaagcaccagtaatgacaaggtggttttagtg
tctaactacactcagacactggatctatttgaaaagctctgcaggaacagaaggtatttg
tatgtccggctggacggcaccatgtccattaaaaagagagcaaagatcgtggagcgattc
aacagcccctcgagccctgagttcatcttcatgttaagcagcaaagcaggtggctgtggt
ttgaacctgatcggggccaacagactggtgatgttcgaccccgactggaacccagccaac
gacgagcaggccatggctcgcgtgtggcgggatggccagaagaagatgtgctacatctac
cgactgctttcgacagggaccatagaggagaagatattccagcgccagacccacaagaag
gccctgagcagctgtgtggtggatgaagaacaggatgtagaaaggcatttctcacttggg
gagctgaaggagctcttcacgctgaatgagaccaccaccagtgacacccatgacaagatc
aagtgtcgccgctgtgtgaacaggcaccaggtccggcctcctcccgacggctccgactgc
acctcggacctgtcccagtggcaccactgcgccgataagcgcggcctgcaggactctgtg
ctgaaggctgcgtgggatgctgctgtcaccttcactttctatcatcactcccatgaggag
cagcgagggattccctaa
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