Aphelocoma coerulescens (scrub jay): 138114217
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Entry
138114217 CDS
T10543
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138114217 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acoe03041
]
138114217 (PRPF38A)
Spliceosome [BR:
acoe03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
138114217 (PRPF38A)
Complex C
U4/U6.U5 tri-SnRNP related factors
138114217 (PRPF38A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
138114217
NCBI-ProteinID:
XP_068879523
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All DBs
Position
8:27477359..27481057
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AA seq
312 aa
AA seq
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MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHEERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEEEEEEDEKLERIPSPDHRRRGYRDLDKPRRSPVVRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggccaaccgcacggtgaaggacgcgcacagcatccacggcaccaacccgcagtacctg
gtggagaagatcatccgcacgcgcatctacgagtccaagtactggaaggaggagtgtttc
gggctcacggccgagctggtggtggacaaggccatggagctgaagtacgtggggggcgtc
tatggagggaacattaaacccacgcccttcttgtgcctgacgctgaagatgcttcagatc
caacccgagaaggacatcatcgtggagttcataaaaaacgaggacttcaagtatgtccga
atgcttggagcactgtacatgagactgacaggcactgccatcgattgctacaagtacctg
gagccactgtacaatgactatcggaaaattaaaagtcagaacagaaatggggaattcgaa
ctgatgcatgtggatgaatttattgatgagctactccatgaggaacgcgtttgtgacatc
atcctgcctcgactgcagaaacggtatgttctggaagaagctgagcaactcgagcctcgt
gttagtgctctggaagaagatatggatgatgtagaatctagtgaggaggaggaagaagaa
gatgaaaagctggaacggatcccatctcctgaccaccgcagaaggggctacagggacctg
gacaaaccccgcagatctccggtggtgcgctacaggcggagccggagcaggtctccaagg
aggcgcagccgctctccaaagagaagaagcccatcaccacgccgggagaggcatcgcagc
aaaagcccgagacggcaccggagcagatcccgggagaggcgccacagatcgagatctaaa
tctccagggcatcaccgtagtcacagacaccgaagtcattccaaatcacctgaaagatct
aagaaaagtcacaaaaagagtcggcgagggaatgaataa
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