Aphelocoma coerulescens (scrub jay): 138114239
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Entry
138114239 CDS
T10543
Symbol
PRRX1
Name
(RefSeq) paired mesoderm homeobox protein 1
KO
K09329
paired mesoderm homeobox protein
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoe03000
]
138114239 (PRRX1)
Transcription factors [BR:
acoe03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
138114239 (PRRX1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
DUF6210
Motif
Other DBs
NCBI-GeneID:
138114239
NCBI-ProteinID:
XP_068879554
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All DBs
Position
8:7691803..7731512
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AA seq
245 aa
AA seq
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MASSYAHAMERQALLPARLDGPAGLDNLQAKKNFSVSHLLDLEEAGDMVAAQAEEGGGEP
GRSLLESPGLTSGSDTPQQDNDQLNSEEKKKRKQRRNRTTFNSSQLQALERVFERTHYPD
AFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLASKNASLLKSYSGDVTAVEQPIV
PRPAPRPTDYLSWGTTSPYSAMATYSATCTNTSPAQGMNMANSIANLRLKAKEYSLQRNQ
VPTVN
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccagctatgcccacgccatggagaggcaggccctgctgcccgcccgcctcgac
ggccccgccggcctggacaatttacaagccaagaagaacttctccgtgagtcacctgctg
gacctggaggaggcgggcgacatggtggccgcccaggcggaggagggcggcggcgagccc
ggccggagcttgttggagtcccccgggctgaccagcggcagcgacaccccgcagcaggac
aatgatcagctgaactcagaagagaagaagaaaagaaagcagaggaggaacaggactacc
ttcaacagcagccagctccaggcactagagagggtctttgagaggacacactaccccgat
gcctttgtacgggaagaccttgcacgcagagtcaacctcactgaagccagagttcaggtg
tggttccagaaccggagagccaagttccgccggaatgagagggccatgctggccagcaag
aacgcctctctgctcaaatcctactcaggggatgtgacagccgtggagcagcccatagta
cctcgccccgctccgagacccactgactatctctcctgggggaccacctcaccctacagt
gccatggcgacctactctgccacgtgtaccaacaccagcccggcgcagggcatgaacatg
gccaacagtattgccaacctgagactgaaggcaaaggaatatagtttacagaggaatcag
gtgcccacagtcaattaa
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integrated database retrieval system
