Aphelocoma coerulescens (scrub jay): 138114302
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Entry
138114302 CDS
T10543
Symbol
PATJ
Name
(RefSeq) inaD-like protein isoform X1
KO
K06092
InaD-like protein
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
138114302 (PATJ)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
DUF6604
Motif
Other DBs
NCBI-GeneID:
138114302
NCBI-ProteinID:
XP_068879662
LinkDB
All DBs
Position
8:30655381..30795460
Genome browser
AA seq
1843 aa
AA seq
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MPENPAADKQQVLQILDRLQAKLQEKRDSQHQENLAILRNTLRSPLFNQILTLQQSIKQL
KEQLNYMPPDRSVDFDFTKRGLLVFADKSVTAGTPCTSPGPKASAFTPNLGVNEFNMIIQ
QMAKGRQIESIKIDKPSVGGLGFSVVALKNPSLGEVGIFVKEVQPGSIADRDQRLRENDH
ILAINCTPLDQNISHQHAIALLQQSTGSLHLVVAREPLQGNSRTSLLSDVNPPETIHWGH
IEDVELINDGSGLGFGIVGGKSSGVVVRTIVPGGLADRDGRLRTGDHILQIGGTNVQGMT
SEQVAQVLRNCGNSVRMIVARDPKCEVMEAPPPPVSWPVSTLPSLQNGNDNDNFFDTYDV
ELIKKNGQSLGITIVGYAGTCDIEPSGIFVKNIIPGSAADHNGQIHVHDKIVAIDGVNIQ
DFTNQEVVEALRNTGQTVRLTLLRRKPSSAVSSETPSDRGRVPLPPAHELKSKWENLLGP
EYEVMVVNVDMPFTDDSELQKYSKLLPIHTLRLGVELDTFDGHHYISSIAPDSPAAALGL
LQLEDELLEVNGVQLYGKSRREAITFLKEVPPPFTLVCCRRLFDDGTESLVDEPPVAASP
PEQKVKPEEDFNPEEEEGELALWSPDVKVIELEKDKNGLGFSILDYQDPLDPAGTAIVIS
SLVAGGVAERGGQILPGDRLVFVNQKYLDGATLAEAVEVLKSVPPGTVSLGICKPLVGES
REEENMHGVDTSSIKSSPGSPEPIDNTNFSVILEAPQGFRDEAPFKEEFVDEPHLDLGRS
FQLPQKDDEYGKESWEMCEFLKPRAEDVGEEREMLVDEEYEEDSDFLKWEASGGEKATSD
KNLDTERWAKQLETAEIQDLRSSVSLSPKESLEYAFSKDQMCEENATVRSHFSGTTAHSS
YQKDIFDTEPTQSGVKTEMDLGTKLQSDSRGPGLTVDLEAIEKEVLKEESYVFSKNKASG
RVTTLAQPRTASCSELPEREEGEGEETPNFSHWGPPRTVEIFRDPHVSLGISIVGGQTVI
KRLKNGEELKGIFIKQVLEDSPAGRTRALKTGDKILEVSGVDLQNATHEEAVEAIKNAGN
PVVFVVQGLANVPKVVSPAQPKGIKVSKDQDADKENKSDKRKYGAPPPMKLPPPYRALER
HHAEEAALDEEEDEDACAEKKIRQRYADLPGELHIIELEKDKNGLGLSLAGNKDRSRMSI
FVVGINPDGPAGRDGRMHIGDELLEINNQILYGRSHQNASAIIKTAPSKVKLVFIRSEDA
VNQMAVTPFPLPSGSHSAIEDHGGTEPASGEEDPSLEVVMKSLTDEECNKADVKCKADTP
VVADQQETEEQLPENVLNQIKQSRSSTKAPVSSQEIPLEPAPACLSPEAEVPSRSVFPPP
LPVDPATCPIVPGQEMTIEISKGRSGLGLSIVGGKDTPLDAIVIHEVYEEGAAARDGRLW
AGDQILEVNGIDLRNASHEEAITALRQTPQKVQLVVYRNEAHYKDEENLEIFSVDIQKKT
GRGLGLSIAGKRNGSGVFISDIVKGGAADLDGRLIQGDQILSVNGEDMRNASQETVATIL
KCAQGLVHLELGRLRAGSWLSSRKTSQNSQASQQSVHSHFHPALAPVLSTLQNFVSTKRS
SADTSQRNSGGADIGPRTVEITRGPNDALGVSIAGGKGSPLGDIPIFIAMIQASGVAART
QRLRVGDRIVSINGQPLDGLSHADAVNLLKNAYGSIILQVVADTNISAIASQLESMSTGC
SLNAPSEHPAEDPEAPQPKIITLEKGSDGLGFSIVGGYGSPHGDLPIYVKTIFAKGAAAD
DGRLKRGDQIVAVNGEALEGVTHEQAVAILKRQRGTVTLTVLS
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaaatcctgcagcagataagcagcaggtgctgcagatcctggatcggctgcag
gcaaaactgcaggagaagagggattcccaacaccaggaaaacctggctattctacggaac
accctcaggagccccttgttcaaccagatactgactctccagcaatccatcaagcagctg
aaggaacaactcaattacatgcctcctgaccgctcagtggattttgattttaccaagagg
gggttgttggtgtttgctgacaaatcagtcactgctgggacaccttgcacttcacctgga
cccaaagcatcagccttcactccaaacctgggagttaatgaatttaacatgatcatccag
caaatggcaaagggaagacaaatagaatcaataaagattgataaaccttctgttggaggt
ctcggatttagtgtggttgcccttaaaaatcccagcctgggagaagttggtatctttgtc
aaggaagtccagccaggaagcatagctgacagggatcaaagactgagggaaaatgaccac
atactggccattaattgcacgccattggatcagaacatttcccatcagcacgccattgcc
ctcctccagcaatccacaggatccctgcatctggtggtggctcgggagccacttcaaggg
aacagcagaacctccttattaagtgatgtaaatccacctgagactattcactggggccac
attgaagacgttgagctgattaacgatggttcaggattaggctttggaatcgtaggagga
aagtcgagtggagtagttgtaagaacaattgttcctgggggattagcagatcgggatggg
aggctgcggacaggagatcacatcttgcagattggagggaccaacgtgcaaggaatgacc
agtgagcaggttgcccaagtgctgaggaactgtgggaattctgtcaggatgatcgttgcg
agggaccccaagtgtgaagtcatggaggctccaccacctcccgtgagctggccagtcagc
acattgccttcgcttcaaaatggaaatgataatgacaacttttttgatacctatgatgtt
gaacttataaaaaagaatgggcaaagcctgggaataacaattgttggatatgctggcaca
tgtgacatagaaccttcagggatttttgtgaaaaatataatacctggtagtgctgctgac
cacaatggccaaattcatgttcatgacaaaattgttgctattgatggagtcaacatacag
gattttaccaaccaagaagtggtagaggccctgcgaaacacaggacagactgtgcgtctc
accttgcttagaaggaaaccttcttctgctgtttcttcagaaacaccttcagatagagga
agagtcccactccctccagcacatgagctaaaatccaagtgggaaaacctgctgggacca
gaatacgaagttatggttgtgaacgtggatatgccctttacagacgattcagagctccag
aagtactcaaagttactacccatccacactctgagattaggagttgagctggacacgttt
gatggacatcattatatatcatccattgctccagatagcccagctgcagcacttggtctt
ctgcaactggaggatgaacttctggaggtaaatggagtgcagctgtatggaaaatcccgg
cgtgaggccatcaccttcctcaaggaagtgccaccccctttcaccctggtgtgctgccgg
cggctcttcgatgacggcaccgagtccctcgtggacgagccccccgtggcagcttcccct
ccagagcaaaaggtgaaacctgaggaagacttcaatcctgaggaggaagaaggggaattg
gcattatggtctcctgatgtgaaggttattgagctggagaaagacaagaatggtttagga
ttcagcattttagactatcaggatcccttggatccagcaggaacagccattgtgatcagc
tccctggtggcaggtggagtggccgagcgcggggggcagattttgccgggtgaccgcttg
gtgttcgtgaatcagaaatacttggacggtgccaccttggcagaggcagtggaagtgttg
aaatctgtgcccccaggtacagtttcccttggaatctgcaagcctttggtgggagaaagc
agagaggaggagaacatgcacggtgtggatactagcagcatcaaaagcagccctgggtct
ccagaaccaatagataacaccaatttctcagtaatacttgaagcaccacagggtttcaga
gatgaggcaccttttaaagaagagtttgttgatgaaccccatttggacttgggaaggtcg
tttcagcttcctcagaaggatgatgagtatgggaaggagtcctgggagatgtgtgaattt
ctgaaacccagagcagaggacgtgggcgaggaacgggaaatgctggtggatgaggagtat
gaagaggattcagacttcctgaaatgggaggcatcaggtggagagaaggcaacttcagac
aagaacctggatacagaacgatgggcaaagcaactggagactgctgaaatacaagattta
agatccagtgttagcctaagtcccaaagagtccctggaatatgcattcagtaaagatcaa
atgtgtgaagagaatgctactgtaaggtcacacttttctggaaccacagcacacagcagc
taccaaaaagacatatttgatactgaaccaacccagtcaggagtgaaaactgagatggat
ttagggacaaagcttcagagtgactccagaggacctgggcttactgttgatttggaagct
attgaaaaggaagtgctaaaagaggagagttatgttttttccaagaacaaggcatctggg
agagtaaccaccttagctcagcctagaacagcatcatgcagtgaattacccgagagagaa
gaaggagaaggagaagaaactccaaacttcagccactggggaccaccacggactgttgag
atcttcagagaccctcacgtgtctcttggaatcagtattgttggtggacaaactgtcata
aagcgcctgaagaatggagaagaacttaaagggatctttatcaaacaagttttggaagac
agcccagcaggaagaacaagggctttaaaaactggagataaaatacttgaggtttctggg
gtagacctacaaaatgccacccacgaggaagcagtggaagccatcaagaacgcaggaaat
cctgtggtgtttgtagtccagggcttggctaatgtaccaaaagtggtttctcctgcccag
cctaagggaatcaaagtcagcaaagatcaggatgcagacaaagaaaataagagtgataag
agaaaatatggggctccacctcccatgaagctgccacctccttacagagcactcgaaagg
catcatgcagaggaggctgccctggatgaagaggaggatgaggatgcttgtgcagagaaa
aaaatcaggcagagatatgcagatctcccgggagagttgcacattattgagctcgagaaa
gacaagaatgggctggggctcagcctggctggcaacaaggaccgctcccggatgagcatc
ttcgtggttgggatcaatcccgacggccccgcgggacgggacggacggatgcacatcggg
gatgaactcctggagataaacaatcagatattgtatggaagaagccaccagaatgcttct
gcaatcattaaaactgccccatcaaaggtcaagctggttttcatacgaagtgaagatgca
gtcaaccagatggctgtcactcccttcccactgccttcaggctcccactctgctattgag
gaccacggtggcaccgaacctgcaagtggcgaggaagacccgagcttggaagttgtcatg
aaaagcctgactgatgaggaatgcaacaaggctgatgtgaaatgtaaagctgacacacca
gtggtggcagatcagcaggagacagaggagcagctcccagaaaatgtcctcaaccagatc
aaacagtccagatcttccacgaaagcccctgtgagctctcaggagattcccctggagcca
gcacccgcttgcctttctcccgaggcagaagtccccagccgtagtgtcttcccacctcca
ctgcctgtggatccagcaacatgtcccatagttccagggcaggagatgaccatagagatc
tccaagggtcgctcaggcctcgggctcagcatcgttgggggcaaggacactccactggat
gccatagtgatccatgaagtttatgaggagggggccgcagccagagatggcagactttgg
gctggcgatcagattctggaggtgaacgggatcgatctgcggaacgccagccacgaggaa
gcgatcacggcgctgcggcagacgccccagaaggtgcagctggtggtttacaggaatgaa
gcacattacaaggatgaggaaaacctggagattttctctgtagatatccaaaagaaaacg
ggccgagggctggggctcagcatagctgggaaacgaaatggaagtggagtgtttatctct
gacattgttaaaggaggagctgcagacctagatggaagattaattcaaggagatcagatt
ttgtctgtaaatggggaggatatgagaaatgcctcacaagagactgttgccactatactt
aagtgtgcccaaggcctggtgcatcttgaacttgggagattgagagctgggtcatggctg
tcatcacggaaaacatcccaaaacagtcaggcgagccagcagagtgtccacagccacttc
caccctgcgcttgctcccgtcctctccaccttgcagaactttgtcagcacaaaaaggtcc
tcggcagacacatcccagagaaactcaggaggagccgatatcggcccaaggactgtggag
ataacgaggggcccaaatgatgcactgggtgtcagcatagcaggagggaagggcagtccc
ttgggagacattcccatcttcatcgctatgatccaggccagtggagtggctgctcggaca
caaaggctcagagttggagatcggattgtcagcattaatgggcaacctttggatgggctg
tctcatgcagatgcagttaatctactaaagaatgcttatgggagcattatcctgcaggtg
gtggctgacaccaacatcagtgccattgccagccagctggagagcatgtccacgggctgc
agcctgaacgcgccctccgagcaccccgccgaggatcccgaagcacctcaacctaagatt
attactttggagaaaggctctgatggactgggatttagtattgtaggggggtatggaagt
ccccatggagacctgcccatttatgtcaagactatatttgccaagggcgcggcggccgac
gacggacggctgaagcgcggggaccagatcgtggccgtcaacggggaggccctggaaggc
gtcacccacgagcaggccgtggccatcctgaagcgccagaggggcacggtgacactgaca
gtgctgtcctga
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