Aphelocoma coerulescens (scrub jay): 138114479
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Entry
138114479 CDS
T10543
Symbol
NLGN1
Name
(RefSeq) neuroligin-1 isoform X1
KO
K07378
neuroligin
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
138114479 (NLGN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acoe04131
]
138114479 (NLGN1)
Membrane trafficking [BR:
acoe04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
138114479 (NLGN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COesterase
Abhydrolase_3
BD-FAE
Motif
Other DBs
NCBI-GeneID:
138114479
NCBI-ProteinID:
XP_068880043
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Position
9:complement(21447581..21876534)
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AA seq
863 aa
AA seq
DB search
MAFPRSMWLNCVWRATVVHLLHMGLNATFAFSILGFLLHAAAVSSQKLDDTNPVVTTNFG
KIRGIKKELNNEILGPVIQFLGVPYAAPPTGERRFQPPEPPSPWADIKNTTQFAPVCPQN
IIEGRLPEVMLPVWFTNNLDVVSTYVQDQNEDCLYLNIYVPTEDVKRISKECARKPGKKI
CRKGGPLTKKQTDDLGDNDGAEDEDIRDSGGPKPVMVYIHGGSYMEGTGNLYDGSVLASY
GNVIVITVNYRLGVLGFLSTGDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGS
GAGGSCVNLLTLSHYSEGNRWSNSTKGLFQRAIAQSGTALSSWAVSFQPAKYARMLATKV
GCNMSDTVELVECLQKKPYRELVDQDIQPARYHIAFGPVIDGDVIPDDPQILMEQGEFLN
YDIMLGVNQGEGLKFVENIVDSEDGISASDFDFAVSNFVDNLYGYPEGKDILRETIKFMY
TDWADRHNPETRRKTLLALFTDHQWVAPAVATADLHSNFGSPTYFYAFYHHCQTDQVPAW
ADAAHGDEVPYVLGIPMIGPTELFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDT
KFIHTKPNRFEEVAWTRYSQKDQLYLHIGLKPRVKEHYRANKVNLWLELVPHLHNLNDIS
QYTSTTTKVPSTDNTFRPTRKNSVSVTSAFPTAKQDDPKQQPSPFSVDQRDYSTELSVTI
AVGASLLFLNILAFAALYYKKDKRRHDVHRRCSPQRTTTNDLTHAQEEEIMSLQMKHTDL
DHECESIHPHEVVLRTACPPDYTLAMRRSPDDIPLMTPNTITMIPNTIPGIQPLHTFNTF
TGGQNNTLPHPHPHPHSHSTTRV
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcctttccaagatccatgtggctgaactgtgtatggagagcgacggtggtccacctg
ctacacatgggattgaatgccacttttgctttttctatacttggatttttgcttcacgct
gcagctgtgtcctcccaaaaattggatgataccaatccagtggtgaccaccaactttggc
aagataagagggattaagaaggaacttaataatgaaattttggggcccgttattcagttt
ctcggggttccatacgctgcccctccaacaggggagcgccgctttcaacctcctgagcct
ccatctccctgggcagatatcaaaaataccacccagtttgctccagtgtgtccccagaac
attatagaaggcaggttgcctgaagtcatgcttcccgtgtggtttactaataacttggat
gtagtttcaacctatgtacaagatcagaacgaagactgcctctatttaaatatctatgtc
ccaactgaggatgtcaaaagaatatccaaggaatgtgccagaaaacccggcaagaaaatt
tgtagaaaaggaggtccccttacaaagaaacagacagatgatttaggtgataatgacggt
gctgaagatgaagacattcgggacagtgggggacctaagcctgtgatggtgtatattcat
ggagggtcctacatggaaggcactggaaatttatatgatggcagtgtcctagcaagttat
gggaatgtgatagtcatcacagtcaactatcgccttggggtacttggatttctgagcacc
ggggaccaagcagcaaaaggaaactatggcctccttgatctaattcaagctttgagatgg
actagtgaaaatattgggttctttggtggtgacccattaagaataactgtttttggatct
ggtgcaggcggttcatgcgtcaatctgttgactttatcccattattctgaaggtaaccgt
tggagcaattcaaccaaaggactttttcaaagagcaatagctcaaagcggaacagctctc
tccagctgggcagttagttttcagcctgcaaaatatgccaggatgttggctacaaaagtt
ggttgcaacatgtcagacactgtagaactggtagaatgtctacagaagaagccttataga
gaacttgtcgaccaggacattcaaccagcaagataccatatagcctttggaccagtaatc
gacggcgatgtgataccagacgaccctcagatcttgatggaacaaggagaattcctcaac
tatgacatcatgctgggagttaaccaaggagaagggttgaagtttgttgaaaacattgtg
gatagtgaagatggcatatcagccagtgattttgactttgcagtttctaattttgtcgat
aacttatatggatatcccgaaggcaaagatatattgagggaaactattaaatttatgtac
acggactgggcagaccgacacaatcccgagaccagaaggaaaacactgctggctttgttt
actgatcaccagtgggttgcaccagcagtggccacagcagatcttcactcgaattttgga
tcgcctacatatttctatgccttctaccatcattgccagacagatcaggtacctgcatgg
gcagatgcagcccatggagatgaggttccttacgtactaggaattcccatgattggtcct
actgagttatttccttgtaatttctccaaaaatgatgtcatgctaagtgcagtggtgatg
acgtactggacaaactttgcaaaaactggtgacccaaatcaaccagtgccgcaagacaca
aaattcatccacacaaaaccaaatcgttttgaagaagtagcatggaccagatattctcag
aaagaccaactgtatcttcacattggattaaaaccacgagttaaagaacactatagggcc
aataaggtgaacctttggttggaactggtacctcatctgcacaatcttaacgacatttca
cagtatacctctaccacaactaaagtgccatcgactgataatactttcagacccacaagg
aaaaattctgtttcagttacttcagcctttcctacagccaaacaagatgaccccaaacaa
caaccaagcccattttcagtggatcaaagggactactcaacagaattgagtgttactatt
gcggttggcgcatctttgctgttcctgaacattttggcctttgcagcgttgtactacaaa
aaagacaagcggagacatgatgttcacaggagatgtagcccacaacgtaccactaccaat
gatctcacccatgcacaagaagaggagataatgtccctccaaatgaagcacactgacttg
gatcatgaatgtgagtccatccatccacatgaggtggttcttaggaccgcctgtccccca
gactacacgctagctatgagaaggtctcctgatgatatccccttaatgacacccaacacc
atcacaatgatccccaacactataccagggattcagcccctacacacattcaacacattt
actggaggacagaacaatactctgccccatcctcatccccacccccattcacactcaaca
accagggtatag
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