Aphelocoma coerulescens (scrub jay): 138114489
Help
Entry
138114489 CDS
T10543
Symbol
CLDN1
Name
(RefSeq) claudin-1
KO
K06087
claudin
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03272
Virion - Hepatitis viruses
acoe04382
Cornified envelope formation
acoe04514
Cell adhesion molecule (CAM) interaction
acoe04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
138114489 (CLDN1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
138114489 (CLDN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
138114489 (CLDN1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
138114489 (CLDN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
acoe03037
]
138114489 (CLDN1)
04147 Exosome [BR:
acoe04147
]
138114489 (CLDN1)
Cilium and associated proteins [BR:
acoe03037
]
Other cilia and associated proteins
Stereociliary proteins
138114489 (CLDN1)
Exosome [BR:
acoe04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
138114489 (CLDN1)
Exosomal proteins of colorectal cancer cells
138114489 (CLDN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Voltage_CLC
CD20
OppC_N
DUF4134
Cytochrom_B_C
HlyIII
Motif
Other DBs
NCBI-GeneID:
138114489
NCBI-ProteinID:
XP_068880070
LinkDB
All DBs
Position
9:15840891..15852404
Genome browser
AA seq
211 aa
AA seq
DB search
MASGGLQLLGFVMAFLGWIGIIISTAMPQWKMASYAGDNIVTAQALYEGLWMSCAMQSTG
QIQCKVYDSLLKLESSLQATRALMVASILLGLVGVFVAVTGMKCMKCMEDDQVKKMRMAV
FGGVIFIISGLAALVATSWYGNRVARAFYDPFTPVNTRFEFGSALFIGWAAASLAILGGS
FLCCSCPRRETSYPPTRGYPKNASSTGKDYV
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggccagcggagggctgcagctcctgggcttcgtcatggccttcctcggctggatcggc
atcatcatcagcaccgccatgccccagtggaagatggcatcctacgcgggggacaacatt
gtcacggcccaggcgctctacgaggggctgtggatgtcgtgcgccatgcagagcacgggg
cagatccagtgcaaggtgtacgactcgctgctcaagctggagagcagcctgcaggccaca
agggctttgatggtggcttcaatactcctggggcttgtcggagtgtttgttgctgtgaca
ggcatgaaatgcatgaagtgcatggaagatgatcaggtgaagaagatgaggatggctgtc
ttcggtggggtgatcttcatcatttcaggtctggcagcactggtggccacgtcgtggtat
ggcaacagagtggctcgggccttttatgaccctttcacccctgtcaacaccagatttgaa
tttgggtcagctctcttcattggctgggcagctgcatctctggccatactggggggatcc
ttcctctgctgctcctgtccacggagagaaacttcatatccacccacccgaggctaccca
aaaaatgcctcctccacagggaaggattatgtataa
DBGET
integrated database retrieval system
