Aphelocoma coerulescens (scrub jay): 138114502
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Entry
138114502 CDS
T10543
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
138114502 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acoe04131
]
138114502 (VPS8)
Membrane trafficking [BR:
acoe04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
138114502 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
Beta-prop_WDR36-Utp21_1st
TPR_VPS8_2
zf-RING_Vps41
WD40_CDC20-Fz
zf-RING_11
Clathrin
zf_RING_Vps8_fungal
TPR_Vps41
zf-RING_2
Beta-prop_WDR5
zf-RING_UBOX
Beta-prop_WDR3_1st
WDR55
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
138114502
NCBI-ProteinID:
XP_068880101
LinkDB
All DBs
Position
9:1679306..1748041
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AA seq
1392 aa
AA seq
DB search
MAAAPEPAEPEPCPEPPAHRLSVVELDRELDSRSELIDDKEFDIPQVDTPPTLESILNET
DDEEESFILEDPFLLNIDNTDTHSYDTSSVASSDSGDRTHLKRKKKLPDSLSLHGSVIRL
SLLKGISAQIVSAADKVDAGLPTAIAASNLIAVGTSHGLALIFDQNQALRLCLGSTAVGA
QYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDAHPPGTAILHIKFTDDPT
LAICNDSGGSVFELSFKRVMGVRTCESRCLFSGSKGEVCCIEPLHAKADLRDHPITQYSL
LAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVAVQNSVNPMLAFCRGDVV
HFLLVKRDDTGAIHVTKQRQLHLHYDLINFTWINSRTAVLLDSVEKLHVIDRQTQEELET
VEISEVQLVYNSSHFKSLATGGNVSEALALVGEKACYQSISSCGGQIFYLGTKSVHVMTL
RSWRERVDHLLKQERLTDALALAWSFYEGKAKAVVGLTGDTSKRKAVIADRMVEILLHYT
DRTLKKCPDQGKIQVMEQHFQDVVPVIVDYCLLLQRMDLLFNQIYDKMSENSVAKGIFLE
CLEPYILSDKLMGITAQVMKDLLLHFQDKNRLENLEACIVHMDITSLDIQQVVLLCWENR
LYDAMIYVYNSGMNDFISPMEKLFKVIAPPLNAGKSLTDEQVVMGNKLLVYISCCLAGRA
YPLGDIPEDLVPLVKNQVFEFLIRLHSSEGSVDEEVYPYVRTLLHFDTREFLNVLALTFE
DFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQLAKPNNTLFVNRTLFD
QVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIQMAEKAEFYQICEFMYERQL
RYDKIIGCYLRDPLRKEEVFNYIHNILSMPGYSAEEKQLVWQKALDHIEELLVLSPGKAA
DLAAIHFSEQIESIISNLQDQFLLFQFLRSLLDPREGINQDLLHLPSCISEQFIELLCQY
SPDQVLETLKVLEYCRLEETIQITQKHQLHEASSYLLEKKGDIHGAFLVMLERLQSKLLM
LTQDDESSAEPSLLENIEDTLMKTIALCQRNSHSLDQQQREALWFPLLEAMMSPQKSSGS
SQCPYSESLKSLTMQVLNNMAAFIALPSILQRILQDPVYGKGKLGEIQGLVLGMLDTFNY
EQTLLETTTSLLNHDLHWSLCNLRASVTRGLTPKQDYCCICLQQYKRRQETADEIIVFSC
GHLYHSLCLLSKECGMVTKGIMRWMCYKCNSSNKGGKLSENFSELKKGTAASLAQMSSES
VLDPQQIQAFDQLCRLNRGTSRLALLTELARGGHGGDKHGLLSVSHGDPATSSVFQNENF
QLRLTPPPLAEE
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcccccgagccagcggagcccgagccgtgcccggagccgcccgcgcaccgc
ctgagtgtggtggagctcgaccgtgagctggactctcgcagcgagctgattgatgacaaa
gaattcgacattcctcaagttgatacccctccaacactggagagcatcctaaatgagact
gatgatgaagaagagtctttcattttggaggatccctttctcttgaacattgataacacg
gatacacactcctatgacacctcttctgtggccagctctgacagtggggacaggacacac
ctgaaaaggaagaaaaaactcccagattctctctcactccacggatcagtgatacggctc
tcgctcctgaaagggatttctgcccaaatagtgtctgcagcagacaaagtggatgctggc
ctgcccactgcaattgcagcatcaaatctgatagcagtggggacctcccatgggttagca
ctgatatttgatcagaaccaggctctccggctgtgcctgggcagcactgcggttggggcc
cagtacggggccatctctgctctcagcatcaacaatgactgttccaggctgctctgtggc
tttgcaaaaggacagatcaccatgtgggatctggccagtgggaagctgctgcgatcaata
acagatgcccaccccccaggaacagccattttgcacatcaagtttacagatgatccaaca
cttgcaatttgcaatgacagcggaggctctgtgtttgaactgtcatttaagagggttatg
ggagtgaggacgtgcgagtctcggtgtctcttcagtggctccaagggggaagtttgctgt
attgagccattacatgcaaaggctgatttgagagaccatcctatcacccagtattcactg
ctggccatggcctccctcactaagattctggttattggcctgaagccatctctgaaagtg
tggatgacctttccctacggccgtatggacccttccagtgtccctctgctggcgtggcac
tttgtggctgtgcagaactcggtgaaccccatgcttgccttctgtcgaggagacgtcgtg
cactttcttctggtcaagagggatgatactggtgcaatccatgtcacgaagcagaggcag
cttcatctgcactatgatctcatcaactttacttggatcaactcacggacagcggtgctg
ctggacagtgtggagaagctgcacgtcatagaccgtcagactcaggaggagctggagact
gtcgagatctcagaggttcagctggtctacaacagcagccacttcaagtctctggccacg
gggggcaatgtcagcgaggccctggcactggtgggagagaaagcttgttaccagtctatc
agcagctgtggtggtcagatcttctaccttggaactaagtctgttcatgtcatgacattg
agaagctggagagagagagttgaccaccttctgaaacaagaacgtctcacagatgccctg
gctcttgcttggtctttttatgaaggtaaagcaaaggctgttgtaggcttgactggggac
acgagcaagaggaaagcagtcattgctgacagaatggttgaaatccttctccattacact
gatcggactctgaagaaatgtcctgaccaagggaaaatccaggttatggagcagcacttc
caggatgtggtgcctgtcatcgtggattactgcctcctgctgcagcgcatggatctatta
tttaaccagatatatgataagatgagtgagaactctgtagctaaaggcatctttctggag
tgcttggagccatatatcttgagtgataagctgatgggaatcacagctcaagtgatgaaa
gacttgctgcttcacttccaagacaagaacaggttggaaaacttggaagcctgcattgtg
catatggatatcaccagtttagacatacagcaggtggttctcctgtgctgggaaaaccgc
ctgtacgatgccatgatctacgtctacaacagcgggatgaacgacttcatcagtcccatg
gagaagctgttcaaagtcattgctcctccactgaatgctgggaagtctctcacagatgag
caggtggtgatgggtaacaagctgcttgtatatataagctgctgcttggcaggccgtgca
tatccattgggtgatattcctgaagatctggtacctttggtgaaaaatcaggtgtttgag
tttctgatccggctgcactcatctgagggctctgtggatgaggaggtgtatccctacgtt
cggaccctgctgcacttcgacacacgggaattcctcaatgtgctggctctgacttttgaa
gactttaagaatgacaagcaagctgtggagtatcaacagagaattgtggacattcttctg
aaagtcatggtggagaattctgacttcaccccatcccaggttggctgtctctttaccttt
cttgcccggcagctcgccaagcccaacaacaccttgtttgtcaacaggacactgtttgac
caggtgctggagttcctgtgcagcccggatgatgactcccggcattccgagaggcagcag
gtccttctggagctgctccaggcaggagggatcgtgcagtttgaagagagccgccttatc
caaatggcagagaaggctgagttctaccagatttgtgagttcatgtatgaacggcagctt
cgctatgacaaaatcatcggctgttacctgcgggatcccctgaggaaggaagaagttttc
aactacatccacaacatcctgtccatgcctggctacagtgctgaggagaagcagctggtg
tggcagaaagctttggaccatatagaggagctgctggtgctgagcccaggtaaagcagct
gacttggcagccattcacttcagcgagcagatcgagagcatcatctcaaacctgcaggac
cagttcttgctcttccagttcctgaggagtctccttgatccgagagaaggcattaaccaa
gacctgctacacctcccatcctgcatcagtgagcagttcatcgagctgctctgtcagtac
agcccggaccaggttttggagacactcaaagttctggaatactgcagactggaggaaacc
atccagataacccaaaaacatcagctccatgaggcttcttcctatttactggagaagaag
ggagatatccatggtgcctttttggttatgcttgagcgattgcagagcaagttgctgatg
cttactcaagatgatgaaagctcagctgaaccttccttgctagaaaatattgaagatact
ttaatgaaaacaattgctctttgccagaggaattcacacagtttagaccagcaacagcga
gaggccctgtggtttcccctgctggaggccatgatgtccccacagaaatcctctggttcg
tcgcagtgtccatactctgaatctttgaagagtttgacaatgcaagtgctgaacaacatg
gctgcgtttattgctcttccttcaatcctgcagagaattctccaggatccagtttatgga
aaagggaaacttggagaaattcaagggcttgtcctgggaatgctggacactttcaactat
gagcaaacccttctagagacaaccacgagccttttaaaccacgatctccactggtccctg
tgtaacctgagagcctctgtcaccagaggccttaccccaaagcaggattactgctgcatc
tgtctccagcagtacaaaaggaggcaagaaactgctgatgaaatcattgttttcagctgt
ggccacttgtaccactcgttgtgcctgctgagtaaggagtgtgggatggtcaccaagggc
atcatgaggtggatgtgctacaaatgcaactcaagcaacaagggagggaagctgagtgag
aacttctcagagctgaaaaaagggactgcagcctccctggcacagatgagttcagagtct
gtgttggatcctcagcaaatccaggcttttgatcagctctgccgactcaaccgaggcacc
tcccgactggctctcctgacggagctggcacgtgggggccacggcggtgacaagcacggg
ctgctcagtgtttcccacggggacccggccaccagcagcgtcttccagaacgagaacttc
cagctgcgcctgacgccccctccgctggctgaagagtag
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integrated database retrieval system
