Aphelocoma coerulescens (scrub jay): 138114510
Help
Entry
138114510 CDS
T10543
Symbol
ATG4B
Name
(RefSeq) cysteine protease ATG4B isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04136
Autophagy - other
acoe04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138114510 (ATG4B)
04136 Autophagy - other
138114510 (ATG4B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
acoe01002
]
138114510 (ATG4B)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acoe04131
]
138114510 (ATG4B)
03029 Mitochondrial biogenesis [BR:
acoe03029
]
138114510 (ATG4B)
Peptidases and inhibitors [BR:
acoe01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
138114510 (ATG4B)
Membrane trafficking [BR:
acoe04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
138114510 (ATG4B)
Mitochondrial biogenesis [BR:
acoe03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
138114510 (ATG4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
138114510
NCBI-ProteinID:
XP_068880114
LinkDB
All DBs
Position
9:complement(3307329..3328056)
Genome browser
AA seq
393 aa
AA seq
DB search
MDAATLTYDTLRFEYEDFPETKEPVWILGRKYSVFTEKEEILLDVTSRLWFTYRKNFPAI
GGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWIKGKRQMDNYFNVLNAFIDKKDS
YYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLRKLATFDTWSSLAVHIAMDNTVVMEEIRR
LCQSNVPCAGAAACPALESDVLYNGCPEDVGLRERLSPWKPLVLLIPLRLGLTEINEAYI
ETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPSDSGCLPDESFH
CQHPPCRMNIAELDPSIAVGFFCNTEADFNDWCQQIKKLSLVRGALPMFELVERQPSHFS
NPDVLNLTPDSSDADRLERFFDSEDEDFEILSL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggacgcagctactcttacctatgacaccctcaggttcgagtatgaagacttccctgag
accaaagaacccgtttggatcctcggccggaaatacagtgtttttacagagaaggaggag
atcctgttggatgtgacctctcggctttggttcacctacagaaagaacttccctgctatt
ggaggaaccggtcccacctctgacacgggctggggctgcatgctgcgctgtggccagatg
atctttgctcaggccttggtctgcaggcatttgggaagagactggaggtggataaaaggg
aagaggcagatggataattacttcaacgttcttaatgccttcattgacaaaaaagacagc
tactactccattcaccagatagcccagatgggagtcggggagggaaaatccataggccag
tggtacggaccaaacacggtcgcgcaggtgctcagaaaacttgcaacttttgacacgtgg
agttccctggcagtacacatagccatggacaacacagtggtgatggaagaaatcaggcgg
ttgtgccagtccaacgtgccctgtgctggagctgcagcgtgccctgccctggagtcagac
gtgctctataacgggtgcccagaggacgtggggctcagagagaggctctccccatggaaa
ccactggtgctgctgatacctctccgcctcgggctcacagagatcaatgaagcctatatt
gaaacactaaagcactgcttcatgatgccccagtccctgggagtgatcggagggaagcca
aacagtgctcattacttcattggctatgtaggtgaggagctcatttacctggatccccac
accacgcagccggcggtggagcccagcgacagcggctgcctccccgacgagagcttccac
tgccagcaccctccgtgcaggatgaacatcgccgagctcgacccctccattgccgtgggc
tttttctgcaacacagaggcagactttaatgactggtgccagcaaatcaaaaagctgtcc
ctggtcagaggagcgctgcccatgtttgagctggtggaacgccagccctcacacttctcc
aaccctgatgtcctgaatctcacaccagactcctctgatgccgacagattggaaaggttc
tttgactcggaagatgaagactttgaaatcctgtccctttga
DBGET
integrated database retrieval system
